Hi Ed,
Yeah, I had the impression it was your fault..! :p
Anyway, I am fixing other things at the moment.
Please let me know when this is fixed.
Cheers,
Séb :)
On 11-08-25 12:40 PM, Edward d'Auvergne wrote:
Hi,
I'm working on this at the moment. Unfortunately the main 1.3 line is
severely broken at the moment! The new multi-processor package is
clashing with and causing relax to die hard on the test-suite and the
GUI. The main cause is IO redirection of sys.stdout and sys.stderr.
The multi-processor code (even in uni-processor mode) is hijacking the
streams and the test suite and GUI do not know what to do anymore.
Once I eliminate all the IO redirection of the multi package, apart
from the IO capture on the slave processes which is non-functional
anyway, then the test-suite should be back in order. I noticed you
performed an svnmerge, and this is likely causing the breakages in
your branch.
Regards,
Edward
On 25 August 2011 12:23, Sébastien Morin<sebastien.morin@xxxxxxxxx> wrote:
Hi Ed,
While working on "inversion-recovery" branch, I realized that the system
tests "Relax_fit.check_curve_fitting__exp_2param_neg" and
"Relax_fit.check_curve_fitting__exp_3param_inv_neg" were failing. In order
to pin point the problem, I checked on the main 1.3 branch (514439) and
system test "Relax_fit.check_curve_fitting" also failed, with the same
error:
==========
======================================================================
ERROR: check_curve_fitting (test_suite.system_tests.relax_fit.Relax_fit)
Check the results of the curve-fitting.
----------------------------------------------------------------------
relax> pipe.create(pipe_name='mf', pipe_type='mf')
Traceback (most recent call last):
File
"/Users/semor/Documents/pse-4/collaborations/relax/relax-1.3/test_suite/system_tests/relax_fit.py",
line 60, in check_curve_fitting
self.assertEqual(cdp.curve_type, 'exp')
AttributeError: 'PipeContainer' object has no attribute 'curve_type'
----------------------------------------------------------------------
Ran 1 test in 0.001s
FAILED (errors=1)
==========
I tried changing the pipe type from "mf" to "relax_fit" (as it should be).
This did not solve the issue...
Any idea ?
Thanks !
Séb :)
--
Sébastien Morin, Ph.D.
Postdoctoral Fellow, S. Grzesiek NMR Laboratory
Department of Structural Biology
Biozentrum, Universität Basel
Klingelbergstrasse 70
4056 Basel
Switzerland
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Sébastien Morin, Ph.D.
Postdoctoral Fellow, S. Grzesiek NMR Laboratory
Department of Structural Biology
Biozentrum, Universität Basel
Klingelbergstrasse 70
4056 Basel
Switzerland
Re: System test "Relax_fit.check_curve_fitting"