mailRe: [sr #3043] Support for NMRPipe seriesTab format *.ser


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Posted by Troels Emtekær Linnet on August 02, 2013 - 21:18:
In pipe_control\spectrum.py .read()
Would that be adding to the epydoc string?

from:
    @keyword spin_id:       The spin ID string used to restrict data
loading to a subset of all spins.
    @type spin_id:          None or str

to:
    @keyword spin_id:       The spin ID string used to restrict data
loading to a subset of all spins. If 'auto' is provided for a NMRPipe
seriesTab formatted file, the ID's are auto generated in form of
Z_A{i}.
    @type spin_id:          None or str

And in user_functions\spectrum.py
from:
uf.add_keyarg(
    name = "spectrum_id",
    py_type = "str_or_str_list",
    desc_short = "spectrum ID string",
    desc = "The unique spectrum ID string to associate with the peak
intensity values."
)

to:
uf.add_keyarg(
    name = "spectrum_id",
    py_type = "str_or_str_list",
    desc_short = "spectrum ID string",
    desc = "The unique spectrum ID string or list of strings to
associate with the peak intensity values. If 'auto' is provided for a
NMRPipe seriesTab formatted file, the ID's are auto generated in form
of Z_A{i}."
)

Best
Troels Emtekær Linnet


2013/8/2 Edward d'Auvergne <edward@xxxxxxxxxxxxx>:
Oh, it needs documenting in the backend pipe_control.spectrum.read()
function as well.

Regards,

Edward

On 2 August 2013 20:59, Edward d'Auvergne <edward@xxxxxxxxxxxxx> wrote:
All applied.  Now, the 'auto' option for the spectrum.peak_intensities
user function needs to be documented in the user function :)

Regards,

Edward

On 2 August 2013 20:48, Troels E. Linnet
<NO-REPLY.INVALID-ADDRESS@xxxxxxx> wrote:
Follow-up Comment #57, sr #3043 (project relax):

Made changes according to suggestions.



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