Re: [sr #3043] Support for NMRPipe seriesTab format *.ser -- August 02, 2013 - 21:27

That's perfect.  I just realised though, that there should be a
section in the user function docstring for NMRPipe seriestab (maybe
between the NMRView and Generic intensity file parts).  This is the
main thing the user will read and then realise that relax has support
for NMRPipe seriestab files.  Something for later.

Regards,

Edward


On 2 August 2013 21:17, Troels Emtekær Linnet <tlinnet@xxxxxxxxx> wrote:
> In pipe_control\spectrum.py .read()
> Would that be adding to the epydoc string?
>
> from:
>     @keyword spin_id:       The spin ID string used to restrict data
> loading to a subset of all spins.
>     @type spin_id:          None or str
>
> to:
>     @keyword spin_id:       The spin ID string used to restrict data
> loading to a subset of all spins. If 'auto' is provided for a NMRPipe
> seriesTab formatted file, the ID's are auto generated in form of
> Z_A{i}.
>     @type spin_id:          None or str
>
> And in user_functions\spectrum.py
> from:
> uf.add_keyarg(
>     name = "spectrum_id",
>     py_type = "str_or_str_list",
>     desc_short = "spectrum ID string",
>     desc = "The unique spectrum ID string to associate with the peak
> intensity values."
> )
>
> to:
> uf.add_keyarg(
>     name = "spectrum_id",
>     py_type = "str_or_str_list",
>     desc_short = "spectrum ID string",
>     desc = "The unique spectrum ID string or list of strings to
> associate with the peak intensity values. If 'auto' is provided for a
> NMRPipe seriesTab formatted file, the ID's are auto generated in form
> of Z_A{i}."
> )
>
> Best
> Troels Emtekær Linnet
>
>
> 2013/8/2 Edward d'Auvergne <edward@xxxxxxxxxxxxx>:
> > Oh, it needs documenting in the backend pipe_control.spectrum.read()
> > function as well.
> >
> > Regards,
> >
> > Edward
> >
> > On 2 August 2013 20:59, Edward d'Auvergne <edward@xxxxxxxxxxxxx> wrote:
> > > All applied.  Now, the 'auto' option for the spectrum.peak_intensities
> > > user function needs to be documented in the user function :)
> > >
> > > Regards,
> > >
> > > Edward
> > >
> > > On 2 August 2013 20:48, Troels E. Linnet
> > > <NO-REPLY.INVALID-ADDRESS@xxxxxxx> wrote:
> > > > Follow-up Comment #57, sr #3043 (project relax):
> > > >
> > > > Made changes according to suggestions.
> > > >
> > > >
> > > >
> > > > (file #18624)
> > > >     _______________________________________________________
> > > >
> > > > Additional Item Attachment:
> > > >
> > > > File name: mtab.patch.tar.gz              Size:3 KB
> > > >
> > > >
> > > >     _______________________________________________________
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> > > > Reply to this item at:
> > > >
> > > >   <http://gna.org/support/?3043>
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