mailsetting up relax on mac


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Posted by Paul Schanda on August 09, 2013 - 00:19:
I have followed the detailed instructions on
http://wiki.nmr-relax.com/Installation_mac

And everything works fine until I try the scons command, in the section "checking out the relax branch"

This all works fine:
cd /usr/local/
svn co svn://svn.gna.org/svn/relax/branches/relax_disp relax_disp
cd relax_disp

But when I type
 scons

I get:
scons: Permission denied.

This is the case even when I'm root.
How can I not have the permission even when being root?


Furthermore, and probably unrelated to this, numpy seems to be in the wrong path or so.
I try the following:

[new-host-2:/usr/local] paul% relax -g
The dependency 'numpy' has not been installed.

However, numpy is there:

[new-host-2:/usr/local] paul% python
Python 2.7.5 (default, Jun 27 2013, 19:56:45) 
[GCC 4.2.1 Compatible Apple LLVM 4.2 (clang-425.0.28)] on darwin
Type "help", "copyright", "credits" or "license" for more information.
>>> import numpy
>>> 
>>> import scipy
>>> 
>>> 


The following probably gives a hint on what python versions are there.

[new-host-2:/usr/local] paul% locate python | grep '\/python$\|\/python2..$' | grep bin

    
/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7
/Library/Frameworks/Python.framework/Versions/7.3/bin/python2.7
/System/Library/Frameworks/Python.framework/Versions/2.5/bin/python2.5
/System/Library/Frameworks/Python.framework/Versions/2.6/bin/python2.6
/System/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7
/Users/paul/programmdownloads/ccpn2.2/ccpnmr/python2.6/bin/python2.6
/Users/paul/programmdownloads/python_virtualenv/my_new_env/bin/python2.7
/opt/local/Library/Frameworks/Python.framework/Versions/2.5/bin/python2.5
/opt/local/Library/Frameworks/Python.framework/Versions/2.6/bin/python2.6
/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7
/opt/local/bin/python2.4
/opt/local/bin/python2.5
/opt/local/bin/python2.6
/opt/local/bin/python2.7
/usr/bin/python2.5
/usr/bin/python2.6
/usr/bin/python2.7
/usr/local/bin/python2.7


I don't know which python version is used when I start relax, though.
So I don't know why relax does not seem to find numpy when starting up.




paul




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