Hi Paul,
I think you'll find the solution for the numpy problem at
http://wiki.nmr-relax.com/Multiple_Python_versions. My guess for the
scons problem could be because the code was checked out as root. I
would suggest having the relax_disp branch checked out as a user. You
can always create a symbolic link in ~/bin to this. Of if this is for
multiple users, then in /usr/local/bin.
Regards,
Edward
On 9 August 2013 00:19, Paul Schanda <paul.schanda@xxxxxx> wrote:
I have followed the detailed instructions on
http://wiki.nmr-relax.com/Installation_mac
And everything works fine until I try the scons command, in the section
"checking out the relax branch"
This all works fine:
cd /usr/local/
svn co svn://svn.gna.org/svn/relax/branches/relax_disp relax_disp
cd relax_disp
But when I type
scons
I get:
scons: Permission denied.
This is the case even when I'm root.
How can I not have the permission even when being root?
Furthermore, and probably unrelated to this, numpy seems to be in the wrong
path or so.
I try the following:
[new-host-2:/usr/local] paul% relax -g
The dependency 'numpy' has not been installed.
However, numpy is there:
[new-host-2:/usr/local] paul% python
Python 2.7.5 (default, Jun 27 2013, 19:56:45)
[GCC 4.2.1 Compatible Apple LLVM 4.2 (clang-425.0.28)] on darwin
Type "help", "copyright", "credits" or "license" for more information.
import numpy
import scipy
The following probably gives a hint on what python versions are there.
[new-host-2:/usr/local] paul% locate python | grep '\/python$\|\/python2..$'
| grep bin
/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7
/Library/Frameworks/Python.framework/Versions/7.3/bin/python2.7
/System/Library/Frameworks/Python.framework/Versions/2.5/bin/python2.5
/System/Library/Frameworks/Python.framework/Versions/2.6/bin/python2.6
/System/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7
/Users/paul/programmdownloads/ccpn2.2/ccpnmr/python2.6/bin/python2.6
/Users/paul/programmdownloads/python_virtualenv/my_new_env/bin/python2.7
/opt/local/Library/Frameworks/Python.framework/Versions/2.5/bin/python2.5
/opt/local/Library/Frameworks/Python.framework/Versions/2.6/bin/python2.6
/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7
/opt/local/bin/python2.4
/opt/local/bin/python2.5
/opt/local/bin/python2.6
/opt/local/bin/python2.7
/usr/bin/python2.5
/usr/bin/python2.6
/usr/bin/python2.7
/usr/local/bin/python2.7
I don't know which python version is used when I start relax, though.
So I don't know why relax does not seem to find numpy when starting up.
paul
Re: setting up relax on mac