Re: setting up relax on mac -- August 09, 2013 - 07:08

I may get a bit closer, but I am not quite there yet.
I did install numpy via the dmg file, as described in 
http://wiki.nmr-relax.com/Installation_mac

Nonetheless, I don't know where this numpy version went, because 
apparently it is not seen when running scons.


[new-host-2:~/relax/relax_disp] paul% sudo /usr/libexec/locate.updatedb

dyld: DYLD_ environment variables being ignored because main executable 
(/usr/bin/sudo) is setuid or setgid

Password:

So that works fine. However, scons does not see numpy... :

[new-host-2:~/relax/relax_disp] paul% /usr/local/bin/python 
/usr/local/bin/scons

scons: Reading SConscript files ...

The dependency 'numpy' has not been installed.



I still have this pretty long list of python versions sitting around. I 
don't know how to find out where the different numpy's sit, though.

[new-host-2:~/relax/relax_disp] paul% locate python | grep 
'\/python$\|\/python2..$' | grep bin

/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7

/Library/Frameworks/Python.framework/Versions/7.3/bin/python2.7

/System/Library/Frameworks/Python.framework/Versions/2.5/bin/python2.5

/System/Library/Frameworks/Python.framework/Versions/2.6/bin/python2.6

/System/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7

/Users/paul/programmdownloads/ccpn2.2/ccpnmr/python2.6/bin/python2.6

/Users/paul/programmdownloads/python_virtualenv/my_new_env/bin/python2.7

/opt/local/Library/Frameworks/Python.framework/Versions/2.5/bin/python2.5

/opt/local/Library/Frameworks/Python.framework/Versions/2.6/bin/python2.6

/opt/local/Library/Frameworks/Python.framework/Versions/2.7/bin/python2.7

/opt/local/bin/python2.4

/opt/local/bin/python2.5

/opt/local/bin/python2.6

/opt/local/bin/python2.7

/usr/bin/python2.5

/usr/bin/python2.6

/usr/bin/python2.7

/usr/local/bin/python2.7


paul




On 09.08.13 01:05, Edward d'Auvergne wrote:
> Also, for the Python version, can you update your locate database with
> "sudo /usr/libexec/locate.updatedb"?  I'm not sure if the new Python
> is in the list.  Some more below:
>
>
> > This all works fine:
> >
> > cd /usr/local/
> > svn co svn://svn.gna.org/svn/relax/branches/relax_disp relax_disp
> > cd relax_disp
> >
> > But when I type
> >
> >   scons
> >
> >
> > I get:
> >
> > scons: Permission denied.
>
> Try instead as a normal user:
>
> $ cd ~
> $ mkdir relax
> $ cd relax
> $ svn co http://svn.gna.org/svn/relax/branches/relax_disp
> $ cd relax_disp
> $ /usr/local/bin/python /usr/local/bin/scons
>
> Maybe this will work better.
>
>
> > I try the following:
> >
> > [new-host-2:/usr/local] paul% relax -g
> >
> > The dependency 'numpy' has not been installed.
> Try instead:
>
> % /usr/local/bin/python ~/relax/relax_disp/relax -g
>
> It'll be interesting to see if these commands also give problems.
>
> Regards,
>
> Edward