mail[task #7807] Speed-up of dispersion models for Clustered analysis


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Posted by Troels E. Linnet on June 10, 2014 - 19:06:
Follow-up Comment #72, task #7807 (project relax):

Timing now
Tue Jun 10 19:04:34 2014    /tmp/tmpUgjuF0

         143893 function calls (143880 primitive calls) in 0.346 seconds

   Ordered by: cumulative time

   ncalls  tottime  percall  cumtime  percall filename:lineno(function)
        1    0.000    0.000    0.346    0.346 <string>:1(<module>)
        1    0.001    0.001    0.346    0.346 profiling_cr72.py:427(single)
     1000    0.001    0.000    0.336    0.000 profiling_cr72.py:413(calc)
     1000    0.008    0.000    0.335    0.000
relax_disp.py:992(func_CR72_full)
     1000    0.024    0.000    0.323    0.000
relax_disp.py:526(calc_CR72_chi2)
     1003    0.088    0.000    0.234    0.000 cr72.py:101(r2eff_CR72)
     2003    0.034    0.000    0.119    0.000 numeric.py:2056(allclose)
    10046    0.051    0.000    0.051    0.000 {method 'reduce' of
'numpy.ufunc' objects}
     3000    0.028    0.000    0.046    0.000 shape_base.py:761(tile)


   ncalls  tottime  percall  cumtime  percall filename:lineno(function)
        1    0.000    0.000    1.513    1.513 <string>:1(<module>)
        1    0.001    0.001    1.513    1.513 profiling_cr72.py:449(cluster)
     1000    0.001    0.000    1.439    0.001 profiling_cr72.py:413(calc)
     1000    0.010    0.000    1.438    0.001
relax_disp.py:992(func_CR72_full)
     1000    0.052    0.000    1.420    0.001
relax_disp.py:526(calc_CR72_chi2)
     1300    0.926    0.001    1.201    0.001 cr72.py:101(r2eff_CR72)
     2300    0.100    0.000    0.222    0.000 numeric.py:2056(allclose)
     3000    0.033    0.000    0.156    0.000 shape_base.py:761(tile)
     4000    0.108    0.000    0.108    0.000 {method 'repeat' of
'numpy.ndarray' objects}
    11828    0.085    0.000    0.085    0.000 {method 'reduce' of
'numpy.ufunc' objects}
        1    0.000    0.000    0.073    0.073 profiling_cr72.py:106(__init__)
        1    0.012    0.012    0.057    0.057
profiling_cr72.py:173(return_r2eff_arrays)


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