mailRe: Models tm4 to tm8 not working


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Posted by Edward d'Auvergne on January 04, 2010 - 16:14:
Hi,

You can use google search directly with the text "AttributeError:
'PipeContainer' object has no attribute 'diff_tensor'", or you can use
the search box on http://www.nmr-relax.com/communication.html to
search specific mailing lists.

Regards,

Edward



2010/1/4 Tiago Pais <tpais@xxxxxxxxxxx>:
Hi Edward,
Hope you had nice holydays.
Indeed I had the idea that I had made a similar report but I couldn't find a
way to search the mailing list by keyword (how is this done by the way?)
I will create the bug report in a minute.
Cheers
TiagoP

-----Original Message-----
From: edward.dauvergne@xxxxxxxxx [mailto:edward.dauvergne@xxxxxxxxx] On
Behalf Of Edward d'Auvergne
Sent: segunda-feira, 4 de Janeiro de 2010 12:43
To: Tiago Pais
Cc: relax-users@xxxxxxx
Subject: Re: Models tm4 to tm8 not working

Hi,

This is the same problem as you reported at
https://mail.gna.org/public/relax-users/2009-10/msg00015.html.  Would
you be able to create a bug report for this (at
https://gna.org/bugs/?group=relax)?  If you could include data for a
single spin that triggers the problem, that would be much appreciated
as I would be able to very quickly track down the cause of and fix the
bug.

Cheers,

Edward



2009/12/29 Tiago Pais <tpais@xxxxxxxxxxx>:
Hi,

I tried to run mf_multimodel.py script with the ‘tm’ series (tm0 to tm9).
The script runs well up to ‘tm3’, after that it stops, giving the
following
error message:



Traceback (most recent call last):

  File "/usr/local/bin/relax", line 418, in <module>

    Relax()

  File "/usr/local/bin/relax", line 127, in __init__

    self.interpreter.run(self.script_file)

  File "/usr/local/relax/prompt/interpreter.py", line 276, in run

    return run_script(intro=self.__intro_string, local=self.local,
script_file=script_file, quit=self.__quit_flag,
show_script=self.__show_script,
raise_relax_error=self.__raise_relax_error)

  File "/usr/local/relax/prompt/interpreter.py", line 537, in run_script

    return console.interact(intro, local, script_file, quit,
show_script=show_script, raise_relax_error=raise_relax_error)

  File "/usr/local/relax/prompt/interpreter.py", line 433, in
interact_script

    execfile(script_file, local)

  File "mf_multimodel.py", line 68, in <module>

    grid_search(inc=11)

  File "/usr/local/relax/prompt/minimisation.py", line 156, in grid_search

    minimise.grid_search(lower=lower, upper=upper, inc=inc,
constraints=constraints, verbosity=verbosity)

  File "/usr/local/relax/generic_fns/minimise.py", line 191, in
grid_search

    grid_search(lower=lower, upper=upper, inc=inc,
constraints=constraints,
verbosity=verbosity)

  File "/usr/local/relax/specific_fns/model_free/mf_minimise.py", line
479,
in grid_search

    self.minimise(min_algor='grid', lower=lower, upper=upper, inc=inc,
constraints=constraints, verbosity=verbosity, sim_index=sim_index)

  File "/usr/local/relax/specific_fns/model_free/mf_minimise.py", line
789,
in minimise

    model_type = self.determine_model_type()

  File "/usr/local/relax/specific_fns/model_free/main.py", line 1015, in
determine_model_type

    if cdp.diff_tensor.fixed:

AttributeError: 'PipeContainer' object has no attribute 'diff_tensor'





Anyone had a similar problem?

I tested each model individually with the problem showing up for  models
tm4
to tm8. The other models work

Cheers

TiagoP



**************************************

Tiago Pais, PhD. student

Cell Physiology & NMR

Instituto de Tecnologia Química e Biológica-Oeiras



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relax-users@xxxxxxx

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reminder, or change your subscription options,
visit the list information page at
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