On 13 June 2013 17:25, Troels Emtekær Linnet <
tlinnet@xxxxxxxxx> wrote:
> Sure why not :-)
>
> And I am soon in the mood for the Tollinger/Kay equation.
> And solve the 64 bit problem in windows.
>
> Can you guide me in the direction where I should look for the 64 bit
> problem?
>
> Best
> troels
>
> Troels Emtekær Linnet
>
>
> 2013/6/13 Edward d'Auvergne <
edward@xxxxxxxxxxxxx>
>>
>> Would you like to try to give this a go?
>>
>> Regards,
>>
>> Edward
>>
>>
>> On 13 June 2013 16:35, Troels Emtekær Linnet <
tlinnet@xxxxxxxxx> wrote:
>> > I am happy that you think it is great. :-)
>> >
>> > As soon there is a file type, which can fast be opened by a image
>> > viewer, I
>> > am happy.
>> >
>> > It works for PNG here, and it is very probably a compilation issue.
>> > I have PNG as a possibility to print in my xmgrace menu.
>> >
>> > I found the commands here:
>> >
http://ringo.ams.sunysb.edu/index.php/Xmgrace
>> >
>> > This is for EPS and PNG, but I havent found options for JPEG yet.
>> >
>> > I would say the "more the merrier".
>> > It take's time to create scripts, but no time to delete.
>> >
>> > Best
>> > Troels
>> >
>> >
>> >
>> >
>> > Troels Emtekær Linnet
>> >
>> >
>> > 2013/6/13 Edward d'Auvergne <
edward@xxxxxxxxxxxxx>
>> >>
>> >> That's a great trick! My knowledge of Grace is not that extensive.
>> >> You know what would be even better - if the
>> >> relax_disp.plot_disp_curves user function created this script and
>> >> dropped it into the directory with the Grace files! I've now shifted
>> >> the code into the
>> >> specific_analyses.relax_disp.disp_data.plot_disp_curves() function.
>> >> Such a script could easily be created at the end of this function -
>> >> best by calling a special function in lib.software.grace.
>> >>
>> >> What would be good would be to generate one script for the PNG files,
>> >> maybe called 'grace_to_png.sh' just to be more informative to the user
>> >> that this is for conversion and that it is a shell script, one for EPS
>> >> files called possibly 'grace_to_eps.sh', and a third called
>> >> 'eps_to_pdf.sh'. The plot_disp_curves() function can even make them
>> >> executable for the user. I suggest that the *.tmp files be removed by
>> >> the script at the end.
>> >>
>> >> The only problem is that I tried this and received error messages and
>> >> broken files:
>> >>
>> >> Unknown device: DEVICE "PNG" FONT ANTIALIASING ON
>> >> Unknown device: DEVICE "PNG" OP "compression:9"
>> >> File modifications are disabled in safe mode: PRINT
>> >> File modifications are disabled in safe mode: PRINT
>> >> disp_:70@N agr
>> >>
>> >> The EPS files are created successfully. I'm not sure why the PNGs
>> >> failed, maybe it's not compiled in. JPEG and SVG are present in the
>> >> print options through the GUI though, so maybe scripts for these
>> >> formats can be very easily created as well. A simple loop over 'PNG',
>> >> 'EPS', 'SVG', and 'JPEG' could create separate scripts for each format
>> >> and make them executable, and then at the end the 'eps_to_pdf.sh' can
>> >> be created. The script generation could be documented in the user
>> >> function docstring. What do you think?
>> >>
>> >> Cheers,
>> >>
>> >> Edward
>> >>
>> >>
>> >> On 13 June 2013 14:31, Troels Emtekær Linnet <
tlinnet@xxxxxxxxx> wrote:
>> >> > Hi.
>> >> >
>> >> > I got tired of opening each xmgrace file to see the plot.
>> >> > I found that to export to png, you need to:
>> >> >
>> >> > Add this to the end of the xmgrace file
>> >> >
>> >> > #Print out to
>> >> > @PRINT TO "/home/you/output.png"
>> >> > @HARDCOPY DEVICE "PNG"
>> >> > @DEVICE "PNG" FONT ANTIALIASING on
>> >> > # Make white background transparent
>> >> > #@DEVICE "PNG" OP "transparent:on"
>> >> > @DEVICE "PNG" OP "compression:9"
>> >> > @PRINT
>> >> >
>> >> > Then issue an "HARDCOPY" with xmgrace
>> >> >> xmgrace -hardcopy xmgracefile.agr
>> >> >
>> >> >
>> >> > Script to make both png and eps for a folder with xmgrace files
>> >> >
>> >> > Write in: xmgrace_png
>> >> > and put in your bin folder
>> >> >
>> >> > #!/bin/bash
>> >> >
>> >> > for gracefile in *.agr; do
>> >> > filename=$(basename "$gracefile")
>> >> > extension="${filename##*.}"
>> >> > filename="${filename%.*}"
>> >> >
>> >> > TMPPNG=${filename}_png.tmp
>> >> > cat $gracefile > $TMPPNG
>> >> > echo "#Print out to" >> $TMPPNG
>> >> > echo '@PRINT TO "'"${PWD}/${filename}.png"'"' >> $TMPPNG
>> >> > echo '@HARDCOPY DEVICE "PNG"' >> $TMPPNG
>> >> > echo '@DEVICE "PNG" FONT ANTIALIASING on' >> $TMPPNG
>> >> > echo '# Make white background transparent' >> $TMPPNG
>> >> > echo '#@DEVICE "PNG" OP "transparent:on"' >> $TMPPNG
>> >> > echo '@DEVICE "PNG" OP "compression:9"' >> $TMPPNG
>> >> > echo '@PRINT' >> $TMPPNG
>> >> > xmgrace -hardcopy $TMPPNG
>> >> >
>> >> > TMPEPS=${filename}_eps.tmp
>> >> > cat $gracefile > $TMPEPS
>> >> > echo "#Print out to" >> $TMPEPS
>> >> > echo '@PRINT TO "'"${PWD}/${filename}.eps"'"' >> $TMPEPS
>> >> > echo '@HARDCOPY DEVICE "EPS"' >> $TMPEPS
>> >> > echo '@DEVICE "EPS" OP "level2"' >> $TMPEPS
>> >> > echo '@PRINT' >> $TMPEPS
>> >> > xmgrace -hardcopy $TMPEPS
>> >> >
>> >> > echo "$filename $extension"
>> >> > #eps2png -resolution 200 $TMPEPS
>> >> > #epstopdf $TMPEPS
>> >> > done
>> >> >
>> >> > Then just make "chmod +x xmgrace_png
>> >> > and in the folder, issue an:
>> >> >
>> >> > xmgrace_png
>> >> >
>> >> > sit back and relax
>> >> >
>> >> > If you want to convert eps to pdf
>> >> >
>> >> > bash ;
>> >> > for epsfile in *.eps; epstopdf $epsfile; echo "Making pdf: $epsfile";
>> >> > done
>> >> >
>> >> > Troels Emtekær Linnet
>> >> >
>> >> > _______________________________________________
>> >> > relax (
http://www.nmr-relax.com)
>> >> >
>> >> > This is the relax-users mailing list
>> >> >
relax-users@xxxxxxx
>> >> >
>> >> > To unsubscribe from this list, get a password
>> >> > reminder, or change your subscription options,
>> >> > visit the list information page at
>> >> >
https://mail.gna.org/listinfo/relax-users
>> >
>> >
>
>
Re: A tip for converting the result directories xmgrace files to eps and png