mailMost efficient way to compare spin.X values between pipes


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Posted by Troels Emtekær Linnet on February 14, 2014 - 12:51:
Hi,

I need an efficient way to compare spin.X values between pipes.
Here X could be:

- spin.r2eff
- spin.chi2
- spin.kex
etc.

I have tried implementing the following:

for spin, mol_name, res_num, res_name, spin_id in spin_loop(full_info=True, return_id=True, skip_desel=True):
    cur_r2eff = spin.r2eff[index_str]

The problem is that r2eff is a saved as a dictionary, with a current name convention of:
sq_cpmg_599.%8f_0.000_100.000
sq_cpmg_599.%8f_0.000_133.333
sq_cpmg_599.%8f_0.000_133.%3f

This naming convention is likely to change pattern.

Do there exist a efficient way to compare data values between two pipes?

I would need to compare one pipe to about 50 other pipes, where each
pipe contains about 80 spins recorded at 10-15 v_cpmg frequencies.

The difference between pipe data would undergo standard statistics as RMS etc.

Best
Troels

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