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Posted by Edward d'Auvergne on May 14, 2014 - 18:47:
Hi,

Alternatively, if your work email is going to reveal people's private
email addresses (the address behind my edward att nmr-relax dott com
email alias) as clear text on public mailings lists, do you have
another email system you can use?  The messages are archived
permanently at https://mail.gna.org/public/relax-users/,
http://www.mail-archive.com/relax-users@xxxxxxx/,
http://dir.gmane.org/gmane.science.nmr.relax.user, and
http://marc.info/?l=relax-users&r=1&w=2, so spam bots will easily find
the email addresses your email system is revealing.  Messages can
never be deleted from these archives - they are read only.

Cheers,

Edward



On 14 May 2014 18:38, Edward d'Auvergne <edward@xxxxxxxxxxxxx> wrote:
Hi Vineet,

Your mail software is still revealing my private email address to a
public mailing list!  Please try changing your settings and responding
just to me, to check if this is fixed.  Only once this setting is
turned off would it be safe to respond to the mailing list.  Thanks.

From your log messages, you are reading multiple files into relax.
Can you complete a model-free analysis with this?  If so, could you
created a bug report for this problem?  What does the log message look
like when you get to the grid search or optimisation?

Cheers,

Edward




On 14 May 2014 18:30, Panwalkar, Vineet <v.panwalkar@xxxxxxxxxxxxx> wrote:
Hi Ed,

I had a look at the log files. I reckon all the models within my ensemble 
are added in. Unless I've understood the logs all wrong. Following is the 
excerpt from the logs related to the PDB parser..

relax> structure.read_pdb(file=relax_input.pdb', dir=None, read_mol=None, 
set_mol_name='protein', read_model=None, set_model_num=None, alt_loc=None, 
merge=False)

Internal relax PDB parser.
Opening the file 'relax_input.pdb' for reading.
Adding molecule 'protein' to model 1 (from the original molecule number 1 
of model 1)
Adding molecule 'protein' to model 2 (from the original molecule number 1 
of model 2)
Adding molecule ''protein' to model 3 (from the original molecule number 1 
of model 3)
Adding molecule ''protein' to model 4 (from the original molecule number 1 
of model 4)
Adding molecule 'protein' to model 5 (from the original molecule number 1 
of model 5)
Adding molecule ''protein' to model 6 (from the original molecule number 1 
of model 6)
Adding molecule ''protein' to model 7 (from the original molecule number 1 
of model 7)
Adding molecule 'protein' to model 8 (from the original molecule number 1 
of model 8)
Adding molecule ''protein' to model 9 (from the original molecule number 1 
of model 9)
Adding molecule ''protein' to model 10 (from the original molecule number 
1 of model 10)
Adding molecule ''protein' to model 11 (from the original molecule number 
1 of model 11)
Adding molecule ''protein' to model 12 (from the original molecule number 
1 of model 12)
Adding molecule ''protein' to model 13 (from the original molecule number 
1 of model 13)
Adding molecule ''protein' to model 14 (from the original molecule number 
1 of model 14)
Adding molecule ''protein' to model 15 (from the original molecule number 
1 of model 15)

Regards,

Vineet



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