[bug #11913] Problems with reading Sparky formatted file -- June 28, 2008 - 01:28

URL:
  <http://gna.org/bugs/?11913>

                 Summary: Problems with reading Sparky formatted file
                 Project: relax
            Submitted by: rydog
            Submitted on: Friday 06/27/2008 at 23:10
                Category: relax's source code
                Severity: 3 - Normal
                Priority: 5 - Normal
                  Status: None
                 Privacy: Public
             Assigned to: None
         Originator Name: 
        Originator Email: 
             Open/Closed: Open
         Discussion Lock: Any
                 Release: 1.2.13
        Operating System: GNU/Linux

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Details:

Hello,

First of all, I would like to request that relax support NMRView peak lists.
I appreciate this is not the right location to request this, but the
community is still small, and I'm submitting a bug anyways. I have attached
an example of this type of file (debug.xpk), and a Perl script that can
extract the volume lines (xpk2list.pl). They are attached as the tarball
"convert.tgz"

For the meantime, I have been converting the NMRView peaklists to Sparky with
a script.

The actual session I/O looks like:

noe.read(name,file='cNTnC_noe0_3.list',spectrum_type='ref',format='sparky')
Reference spectrum.
Sparky formatted data file.

Opening the file 'cNTnC_noe0_3.list' for reading.
Number of header lines found: 2
RelaxError: Improperly formatted Sparky file.

I get the same error with a handful of .list files, generated either by my
conversion scripts or from Sparky itself. Three files are attached. The one
ending in '_2' was directly outputted from Sparky.




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File Attachments:


-------------------------------------------------------
Date: Friday 06/27/2008 at 23:10  Name: cNTnC_noe0_2.list  Size: 8kB   By:
rydog

<http://gna.org/bugs/download.php?file_id=4485>
-------------------------------------------------------
Date: Friday 06/27/2008 at 23:10  Name: cNTnC_noe0_3.list  Size: 157B   By:
rydog

<http://gna.org/bugs/download.php?file_id=4486>
-------------------------------------------------------
Date: Friday 06/27/2008 at 23:10  Name: cNTnC_noe0-2.list  Size: 153B   By:
rydog

<http://gna.org/bugs/download.php?file_id=4487>
-------------------------------------------------------
Date: Friday 06/27/2008 at 23:10  Name: convert.tgz  Size: 776B   By: rydog

<http://gna.org/bugs/download.php?file_id=4488>

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