mailr27260 - /trunk/test_suite/unit_tests/_lib/_sequence_alignment/test_needleman_wunsch.py


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Posted by edward on January 21, 2015 - 15:58:
Author: bugman
Date: Wed Jan 21 15:58:43 2015
New Revision: 27260

URL: http://svn.gna.org/viewcvs/relax?rev=27260&view=rev
Log:
Added more printouts to the Test_align_protein.test_align_pairwise unit test.

This is the test of the module _lib._sequence_alignment.test_align_protein.


Modified:
    
trunk/test_suite/unit_tests/_lib/_sequence_alignment/test_needleman_wunsch.py

Modified: 
trunk/test_suite/unit_tests/_lib/_sequence_alignment/test_needleman_wunsch.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/test_suite/unit_tests/_lib/_sequence_alignment/test_needleman_wunsch.py?rev=27260&r1=27259&r2=27260&view=diff
==============================================================================
--- 
trunk/test_suite/unit_tests/_lib/_sequence_alignment/test_needleman_wunsch.py 
      (original)
+++ 
trunk/test_suite/unit_tests/_lib/_sequence_alignment/test_needleman_wunsch.py 
      Wed Jan 21 15:58:43 2015
@@ -35,14 +35,17 @@
         # The sequences.
         seq1 = 'GCATGCU'
         seq2 = 'GATTACA'
+        print("\nIn:")
         print(seq1)
         print(seq2)
 
         # Perform the alignment. 
         align1, align2, gaps = needleman_wunsch_align(seq1, seq2)
+        print("\nOut:")
         print(align1)
         print(align2)
         print(gaps)
+        print("\n")
 
         # Check the alignment.
         self.assertEqual(align1, 'GCA-TGCU')




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