Re: PyMOL is now supported. -- October 31, 2006 - 16:04

I've been using the 1.2 stable branch.  What svn command should I use  
to retrieve the updated code that interacts with PyMOL?

Thanks,
Doug

On Oct 31, 2006, at 9:44 AM, Edward d'Auvergne wrote:

> On 11/1/06, Douglas Kojetin <douglas.kojetin@xxxxxxxxx> wrote:
> > Is there sample data included with relax so we can view this new
> > feature?
>
> A simple way is to test this is invent stuff - that's what I did when
> I was creating this code.  I then applied it to real data later.  For
> example I used the following within a script:
>
> -----
> # Create the run.
> name = 'tensor'
> run.create(name, 'mf')
>
> # Load the PDB file.
> pdb.read(name, 'replace_with_my_protein.pdb')
>
> # Set up and then display the diffusion tensor.
> #diffusion_tensor.init(name, 9e-9)
> diffusion_tensor.init(name, (9e-9, 1e7, 150, 270))
> #diffusion_tensor.init(name, (9e-9, -1e7, 150, 270))
> #diffusion_tensor.init(name, (9e-9, 1e7, 0.5, 60, 290, 100))
>
> # Create the tensor PDB file.
> tensor_file = 'tensor.pdb'
> pdb.create_tensor_pdb(name, file=tensor_file, force=1)
>
> # PyMOL.
> pymol.view(name)
> pymol.cartoon(name)
> pymol.tensor_pdb(name, file=tensor_file)
> -----
>
> Edward