Re: r17460 - /trunk/docs/latex/consistency_tests.tex -- September 05, 2012 - 16:56

Hi,

Thanks for spotting this.

I can't compile the manual using scons. I suspect this is again of 
problem with Python on Mac... But I don't have time nor will to fix it...

I will add the bounding box specs. and then you can tell me if it 
compiles...

Cheers,


Séb  :)


On 12-09-05 4:49 PM, Edward d'Auvergne wrote:
> Hi Seb,
>
> I just tried compiling the manual with your new changes and ran into a
> problem.  For the figure you included in this commit, you will need to
> specify the bounding box (bb).  You can see how that is done in the
> noe.tex file.  The bounding box is found at the end of your eps.gz
> file, which you can open with a text editor.
>
> Cheers,
>
> Edward
>
>
> On 5 September 2012 15:33,  <sebastien.morin@xxxxxxxxx> wrote:
> > Author: semor
> > Date: Wed Sep  5 15:33:12 2012
> > New Revision: 17460
> >
> > URL: http://svn.gna.org/viewcvs/relax?rev=17460&view=rev
> > Log:
> > Added some text to describe the consistency testing example figure.
> >
> > This follows a discussion started by Edward d'Auvergne at:
> > https://mail.gna.org/public/relax-devel/2012-09/msg00019.html
> > (Message-id: 
> > <CAED9pY8XhmmvyfBS7mZA8XZ=4mJZe9TuGjARHoV2tVcjjV9SrQ@xxxxxxxxxxxxxx>)
> >
> > Modified:
> >      trunk/docs/latex/consistency_tests.tex
> >
> > Modified: trunk/docs/latex/consistency_tests.tex
> > URL: 
> > http://svn.gna.org/viewcvs/relax/trunk/docs/latex/consistency_tests.tex?rev=17460&r1=17459&r2=17460&view=diff
> > ==============================================================================
> > --- trunk/docs/latex/consistency_tests.tex (original)
> > +++ trunk/docs/latex/consistency_tests.tex Wed Sep  5 15:33:12 2012
> > @@ -259,3 +259,11 @@
> >
> >   However, simply visualizing the calculated $J(0)$, $F_\eta$, and $F_{R_2}$ 
> > values this way does not allow proper consistency testing. Indeed, for 
> > assessing the consistency of relaxation data using these tests, different 
> > methods exist to compare values calculated from one field to another.  These 
> > include correlation plots and histograms, and calculation of correlation, 
> > skewness and kurtosis coefficients.
> >
> > +An example of such an analysis is shown in Figure \ref{fig: consistency 
> > analysis} below
> > +
> > +\begin{figure*}[h]
> > +\label{fig: consistency analysis}
> > +\includegraphics[width=0.9\textwidth]{graphics/analyses/consistency_testing/consistency__J0_PSE-4.eps.gz}
> > +\caption[Example of consistency testing visual analysis]{Example of 
> > consistency testing visual analysis. Relaxation data from three different 
> > magnetic fields are compared. For each pair of magnetic field, a correlation 
> > plot of the calculated $J(0)$ values (top) as well as an histogram of the 
> > ration of calculated $J(0)$ values (bottom) are shown.}
> > +\end{figure*}
> > +
> >
> >
> > _______________________________________________
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> >
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--
Sébastien Morin, Ph.D.
Postdoctoral Fellow, S. Bernèche Laboratory
Department of Bioinformatics
Biozentrum, Universität Basel
Klingelbergstrasse 50/70
4056 Basel
Switzerland
---- sebastien DOT morin AT unibas DOT ch ----