Well, I compiled now numpy, scipy and minfx from source.
I encountered a problem setting the PATH as you suggested, apparently some
conflict with an existing nmrPipe path.
[gre:~] paul% cd Downloads/
[gre:~/Downloads] paul% cd scipy-0.12.0
[gre:~/Downloads/scipy-0.12.0] paul% PATH=/usr/local/bin/:$PATH
C_INCLUDE_PATH=/sw/include/suitesparse
PATH=/usr/local/bin/:/Library/Frameworks/Python.framework/Versions/Current/bin:/Library/Frameworks/Python.framework/Versions/2.7/bin:.:/Users/paul/nmrpipe/nmrbin.mac:/Users/paul/nmrpipe/com:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/bin:/opt/X11/bin:/Users/paul/nmrpipe/dynamo/tcl:
Command not found.
I also get problems compiling scipy.
[gre:~/Downloads/scipy-0.12.0] paul% /usr/local/bin/python2.7 setup.py
install
Running from scipy source directory.
[I skip some lines but put everything at the end of this message.]
building extension "scipy.sparse.linalg.dsolve._superlu" sources
building extension "scipy.sparse.linalg.dsolve.umfpack.__umfpack" sources
creating build/src.macosx-10.6-intel-2.7/scipy/sparse/linalg/dsolve
creating build/src.macosx-10.6-intel-2.7/scipy/sparse/linalg/dsolve/umfpack
adding 'scipy/sparse/linalg/dsolve/umfpack/umfpack.i' to sources.
swig: scipy/sparse/linalg/dsolve/umfpack/umfpack.i
swig -python -I/opt/local/include -I/opt/local/include
-I/opt/local/include -o
build/src.macosx-10.6-intel-2.7/scipy/sparse/linalg/dsolve/umfpack/_umfpack_wrap.c
-outdir
build/src.macosx-10.6-intel-2.7/scipy/sparse/linalg/dsolve/umfpack
scipy/sparse/linalg/dsolve/umfpack/umfpack.i
unable to execute swig: No such file or directory
error: command 'swig' failed with exit status 1
Funny enough, though, I can import scipy into the python version with which
I compiled scipy:
[gre:~/relax/relax_disp] paul% /usr/local/bin/python
Python 2.7.5 (v2.7.5:ab05e7dd2788, May 13 2013, 13:18:45)
[GCC 4.2.1 (Apple Inc. build 5666) (dot 3)] on darwin
Type "help", "copyright", "credits" or "license" for more information.
import scipy
Maybe the scipy I import is some old stuff that was there before.
I also compiled again minfx from source, as there was also an issue with
minfx when doing
/usr/local/bin/python ~/relax/relax_disp/relax -g
- some dependency issue.
Anyways, this seems to work, minfx is there.
Nonetheless, when doing
/usr/local/bin/python ~/relax/relax_disp/relax -g
I get
[gre:~/relax/relax_disp] paul% /usr/local/bin/python
~/relax/relax_disp/relax -g
Traceback (most recent call last):
File "/Users/paul/relax/relax_disp/relax", line 4, in <module>
import relax
File "/Users/paul/relax/relax_disp/relax.py", line 66, in <module>
user_functions.initialise()
File "/Users/paul/relax/relax_disp/user_functions/__init__.py", line 95,
in initialise
import user_functions.consistency_tests
File "/Users/paul/relax/relax_disp/user_functions/consistency_tests.py",
line 29, in <module>
from specific_analyses.setup import consistency_tests_obj
File "/Users/paul/relax/relax_disp/specific_analyses/setup.py", line 29,
in <module>
from specific_analyses.frame_order import Frame_order
File
"/Users/paul/relax/relax_disp/specific_analyses/frame_order/__init__.py",
line 61, in <module>
from target_functions import frame_order
File "/Users/paul/relax/relax_disp/target_functions/frame_order.py", line
39, in <module>
from lib.frame_order.iso_cone import compile_2nd_matrix_iso_cone,
pcs_numeric_int_iso_cone, pcs_numeric_int_iso_cone_qrint
File "/Users/paul/relax/relax_disp/lib/frame_order/iso_cone.py", line 32,
in <module>
from scipy.integrate import tplquad
File
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/integrate/__init__.py",
line 50, in <module>
from .quadrature import *
File
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/integrate/quadrature.py",
line 6, in <module>
from scipy.special.orthogonal import p_roots
File
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/special/__init__.py",
line 529, in <module>
from ._ufuncs import *
ImportError:
dlopen(/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/special/_ufuncs.so,
2): no suitable image found. Did find:
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/scipy/special/_ufuncs.so:
no matching architecture in universal wrapper
[gre:~/relax/relax_disp] paul%
Seems really complicated getting everything up and running.
Paul
PS:
This is the output of the scipy compilation, of which I showed only a few
lines above:
[gre:~/Downloads/scipy-0.12.0] paul% /usr/local/bin/python2.7 setup.py
install
Running from scipy source directory.
blas_opt_info:
FOUND:
extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
define_macros = [('NO_ATLAS_INFO', 3)]
extra_compile_args = ['-msse3',
'-I/System/Library/Frameworks/vecLib.framework/Headers']
lapack_opt_info:
FOUND:
extra_link_args = ['-Wl,-framework', '-Wl,Accelerate']
define_macros = [('NO_ATLAS_INFO', 3)]
extra_compile_args = ['-msse3']
umfpack_info:
amd_info:
FOUND:
libraries = ['amd']
library_dirs = ['/opt/local/lib']
swig_opts = ['-I/opt/local/include']
define_macros = [('SCIPY_AMD_H', None)]
include_dirs = ['/opt/local/include']
FOUND:
libraries = ['umfpack', 'amd']
library_dirs = ['/opt/local/lib']
swig_opts = ['-I/opt/local/include', '-I/opt/local/include']
define_macros = [('SCIPY_UMFPACK_H', None), ('SCIPY_AMD_H', None)]
include_dirs = ['/opt/local/include']
running install
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler
options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler
options
running build_src
build_src
building py_modules sources
creating build
creating build/src.macosx-10.6-intel-2.7
creating build/src.macosx-10.6-intel-2.7/scipy
building library "dfftpack" sources
building library "fftpack" sources
building library "linpack_lite" sources
building library "mach" sources
building library "quadpack" sources
building library "odepack" sources
building library "dop" sources
building library "fitpack" sources
building library "odrpack" sources
building library "minpack" sources
building library "rootfind" sources
building library "superlu_src" sources
building library "arpack_scipy" sources
building library "sc_c_misc" sources
building library "sc_cephes" sources
building library "sc_mach" sources
building library "sc_amos" sources
building library "sc_cdf" sources
building library "sc_specfun" sources
building library "statlib" sources
building extension "scipy.cluster._vq" sources
building extension "scipy.cluster._hierarchy_wrap" sources
building extension "scipy.fftpack._fftpack" sources
creating build/src.macosx-10.6-intel-2.7/scipy/fftpack
creating build/src.macosx-10.6-intel-2.7/scipy/fftpack/src
conv_template:> build/src.macosx-10.6-intel-2.7/scipy/fftpack/src/dct.c
conv_template:> build/src.macosx-10.6-intel-2.7/scipy/fftpack/src/dst.c
f2py options: []
f2py: scipy/fftpack/fftpack.pyf
Reading fortran codes...
Reading file 'scipy/fftpack/fftpack.pyf' (format:free)
Line #86 in scipy/fftpack/fftpack.pyf:" /* Single precision version
*/"
crackline:2: No pattern for line
Post-processing...
Block: _fftpack
Block: zfft
Block: drfft
Block: zrfft
Block: zfftnd
Block: destroy_zfft_cache
Block: destroy_zfftnd_cache
Block: destroy_drfft_cache
Block: cfft
Block: rfft
Block: crfft
Block: cfftnd
Block: destroy_cfft_cache
Block: destroy_cfftnd_cache
Block: destroy_rfft_cache
Block: ddct1
Block: ddct2
Block: ddct3
Block: dct1
Block: dct2
Block: dct3
Block: destroy_ddct2_cache
Block: destroy_ddct1_cache
Block: destroy_dct2_cache
Block: destroy_dct1_cache
Block: ddst1
Block: ddst2
Block: ddst3
Block: dst1
Block: dst2
Block: dst3
Block: destroy_ddst2_cache
Block: destroy_ddst1_cache
Block: destroy_dst2_cache
Block: destroy_dst1_cache
Post-processing (stage 2)...
Building modules...
Building module "_fftpack"...
Constructing wrapper function "zfft"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = zfft(x,[n,direction,normalize,overwrite_x])
Constructing wrapper function "drfft"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = drfft(x,[n,direction,normalize,overwrite_x])
Constructing wrapper function "zrfft"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = zrfft(x,[n,direction,normalize,overwrite_x])
Constructing wrapper function "zfftnd"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = zfftnd(x,[s,direction,normalize,overwrite_x])
Constructing wrapper function "destroy_zfft_cache"...
destroy_zfft_cache()
Constructing wrapper function "destroy_zfftnd_cache"...
destroy_zfftnd_cache()
Constructing wrapper function "destroy_drfft_cache"...
destroy_drfft_cache()
Constructing wrapper function "cfft"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = cfft(x,[n,direction,normalize,overwrite_x])
Constructing wrapper function "rfft"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = rfft(x,[n,direction,normalize,overwrite_x])
Constructing wrapper function "crfft"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = crfft(x,[n,direction,normalize,overwrite_x])
Constructing wrapper function "cfftnd"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = cfftnd(x,[s,direction,normalize,overwrite_x])
Constructing wrapper function "destroy_cfft_cache"...
destroy_cfft_cache()
Constructing wrapper function "destroy_cfftnd_cache"...
destroy_cfftnd_cache()
Constructing wrapper function "destroy_rfft_cache"...
destroy_rfft_cache()
Constructing wrapper function "ddct1"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ddct1(x,[n,normalize,overwrite_x])
Constructing wrapper function "ddct2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ddct2(x,[n,normalize,overwrite_x])
Constructing wrapper function "ddct3"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ddct3(x,[n,normalize,overwrite_x])
Constructing wrapper function "dct1"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dct1(x,[n,normalize,overwrite_x])
Constructing wrapper function "dct2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dct2(x,[n,normalize,overwrite_x])
Constructing wrapper function "dct3"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dct3(x,[n,normalize,overwrite_x])
Constructing wrapper function "destroy_ddct2_cache"...
destroy_ddct2_cache()
Constructing wrapper function "destroy_ddct1_cache"...
destroy_ddct1_cache()
Constructing wrapper function "destroy_dct2_cache"...
destroy_dct2_cache()
Constructing wrapper function "destroy_dct1_cache"...
destroy_dct1_cache()
Constructing wrapper function "ddst1"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ddst1(x,[n,normalize,overwrite_x])
Constructing wrapper function "ddst2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ddst2(x,[n,normalize,overwrite_x])
Constructing wrapper function "ddst3"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ddst3(x,[n,normalize,overwrite_x])
Constructing wrapper function "dst1"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dst1(x,[n,normalize,overwrite_x])
Constructing wrapper function "dst2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dst2(x,[n,normalize,overwrite_x])
Constructing wrapper function "dst3"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dst3(x,[n,normalize,overwrite_x])
Constructing wrapper function "destroy_ddst2_cache"...
destroy_ddst2_cache()
Constructing wrapper function "destroy_ddst1_cache"...
destroy_ddst1_cache()
Constructing wrapper function "destroy_dst2_cache"...
destroy_dst2_cache()
Constructing wrapper function "destroy_dst1_cache"...
destroy_dst1_cache()
Wrote C/API module "_fftpack" to file
"build/src.macosx-10.6-intel-2.7/scipy/fftpack/_fftpackmodule.c"
adding 'build/src.macosx-10.6-intel-2.7/fortranobject.c' to sources.
adding 'build/src.macosx-10.6-intel-2.7' to include_dirs.
copying
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/f2py/src/fortranobject.c
-> build/src.macosx-10.6-intel-2.7
copying
/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages/numpy/f2py/src/fortranobject.h
-> build/src.macosx-10.6-intel-2.7
building extension "scipy.fftpack.convolve" sources
f2py options: []
f2py: scipy/fftpack/convolve.pyf
Reading fortran codes...
Reading file 'scipy/fftpack/convolve.pyf' (format:free)
Post-processing...
Block: convolve__user__routines
Block: kernel_func
Block: convolve
Block: init_convolution_kernel
In:
scipy/fftpack/convolve.pyf:convolve:unknown_interface:init_convolution_kernel
get_useparameters: no module convolve__user__routines info used by
init_convolution_kernel
Block: destroy_convolve_cache
Block: convolve
Block: convolve_z
Post-processing (stage 2)...
Building modules...
Constructing call-back function
"cb_kernel_func_in_convolve__user__routines"
def kernel_func(k): return kernel_func
Building module "convolve"...
Constructing wrapper function "init_convolution_kernel"...
omega =
init_convolution_kernel(n,kernel_func,[d,zero_nyquist,kernel_func_extra_args])
Constructing wrapper function "destroy_convolve_cache"...
destroy_convolve_cache()
Constructing wrapper function "convolve"...
y = convolve(x,omega,[swap_real_imag,overwrite_x])
Constructing wrapper function "convolve_z"...
y = convolve_z(x,omega_real,omega_imag,[overwrite_x])
Wrote C/API module "convolve" to file
"build/src.macosx-10.6-intel-2.7/scipy/fftpack/convolvemodule.c"
adding 'build/src.macosx-10.6-intel-2.7/fortranobject.c' to sources.
adding 'build/src.macosx-10.6-intel-2.7' to include_dirs.
building extension "scipy.integrate._quadpack" sources
building extension "scipy.integrate._odepack" sources
building extension "scipy.integrate.vode" sources
creating build/src.macosx-10.6-intel-2.7/scipy/integrate
f2py options: []
f2py: scipy/integrate/vode.pyf
Reading fortran codes...
Reading file 'scipy/integrate/vode.pyf' (format:free)
Post-processing...
Block: dvode__user__routines
Block: dvode_user_interface
Block: f
Block: jac
Block: zvode__user__routines
Block: zvode_user_interface
Block: f
Block: jac
Block: vode
Block: dvode
In: scipy/integrate/vode.pyf:vode:unknown_interface:dvode
get_useparameters: no module dvode__user__routines info used by dvode
Block: zvode
In: scipy/integrate/vode.pyf:vode:unknown_interface:zvode
get_useparameters: no module zvode__user__routines info used by zvode
Post-processing (stage 2)...
Building modules...
Constructing call-back function "cb_f_in_dvode__user__routines"
def f(t,y): return ydot
Constructing call-back function "cb_jac_in_dvode__user__routines"
def jac(t,y): return jac
Constructing call-back function "cb_f_in_zvode__user__routines"
def f(t,y): return ydot
Constructing call-back function "cb_jac_in_zvode__user__routines"
def jac(t,y): return jac
Building module "vode"...
Constructing wrapper function "dvode"...
warning: callstatement is defined without callprotoargument
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y,t,istate =
dvode(f,jac,y,t,tout,rtol,atol,itask,istate,rwork,iwork,mf,[f_extra_args,jac_extra_args,overwrite_y])
Constructing wrapper function "zvode"...
warning: callstatement is defined without callprotoargument
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y,t,istate =
zvode(f,jac,y,t,tout,rtol,atol,itask,istate,zwork,rwork,iwork,mf,[f_extra_args,jac_extra_args,overwrite_y])
Wrote C/API module "vode" to file
"build/src.macosx-10.6-intel-2.7/scipy/integrate/vodemodule.c"
adding 'build/src.macosx-10.6-intel-2.7/fortranobject.c' to sources.
adding 'build/src.macosx-10.6-intel-2.7' to include_dirs.
building extension "scipy.integrate.lsoda" sources
f2py options: []
f2py: scipy/integrate/lsoda.pyf
Reading fortran codes...
Reading file 'scipy/integrate/lsoda.pyf' (format:free)
Post-processing...
Block: lsoda__user__routines
Block: lsoda_user_interface
Block: f
Block: jac
Block: lsoda
Block: lsoda
In: scipy/integrate/lsoda.pyf:lsoda:unknown_interface:lsoda
get_useparameters: no module lsoda__user__routines info used by lsoda
Post-processing (stage 2)...
Building modules...
Constructing call-back function "cb_f_in_lsoda__user__routines"
def f(t,y): return ydot
Constructing call-back function "cb_jac_in_lsoda__user__routines"
def jac(t,y): return jac
Building module "lsoda"...
Constructing wrapper function "lsoda"...
warning: callstatement is defined without callprotoargument
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y,t,istate =
lsoda(f,y,t,tout,rtol,atol,itask,istate,rwork,iwork,jac,jt,[f_extra_args,overwrite_y,jac_extra_args])
Wrote C/API module "lsoda" to file
"build/src.macosx-10.6-intel-2.7/scipy/integrate/lsodamodule.c"
adding 'build/src.macosx-10.6-intel-2.7/fortranobject.c' to sources.
adding 'build/src.macosx-10.6-intel-2.7' to include_dirs.
building extension "scipy.integrate._dop" sources
f2py options: []
f2py: scipy/integrate/dop.pyf
Reading fortran codes...
Reading file 'scipy/integrate/dop.pyf' (format:free)
Post-processing...
Block: __user__routines
Block: fcn
Block: solout
Block: _dop
Block: dopri5
In: scipy/integrate/dop.pyf:_dop:unknown_interface:dopri5
get_useparameters: no module __user__routines info used by dopri5
Block: dop853
In: scipy/integrate/dop.pyf:_dop:unknown_interface:dop853
get_useparameters: no module __user__routines info used by dop853
Post-processing (stage 2)...
Building modules...
Constructing call-back function "cb_fcn_in___user__routines"
def fcn(x,y): return f
Constructing call-back function "cb_solout_in___user__routines"
def solout(nr,xold,x,y,con,icomp,[nd]): return irtn
Building module "_dop"...
Constructing wrapper function "dopri5"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y,iwork,idid =
dopri5(fcn,x,y,xend,rtol,atol,solout,work,iwork,[fcn_extra_args,overwrite_y,solout_extra_args])
Constructing wrapper function "dop853"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y,iwork,idid =
dop853(fcn,x,y,xend,rtol,atol,solout,work,iwork,[fcn_extra_args,overwrite_y,solout_extra_args])
Wrote C/API module "_dop" to file
"build/src.macosx-10.6-intel-2.7/scipy/integrate/_dopmodule.c"
adding 'build/src.macosx-10.6-intel-2.7/fortranobject.c' to sources.
adding 'build/src.macosx-10.6-intel-2.7' to include_dirs.
building extension "scipy.interpolate.interpnd" sources
building extension "scipy.interpolate._fitpack" sources
building extension "scipy.interpolate.dfitpack" sources
creating build/src.macosx-10.6-intel-2.7/scipy/interpolate
creating build/src.macosx-10.6-intel-2.7/scipy/interpolate/src
f2py options: []
f2py: scipy/interpolate/src/fitpack.pyf
Reading fortran codes...
Reading file 'scipy/interpolate/src/fitpack.pyf' (format:free)
Post-processing...
Block: dfitpack
Block: splev
Block: splder
Block: splint
Block: sproot
Block: spalde
Block: curfit
Block: percur
Block: parcur
Block: fpcurf0
Block: fpcurf1
Block: fpcurfm1
Block: bispev
Block: bispeu
Block: surfit_smth
Block: surfit_lsq
Block: spherfit_smth
Block: spherfit_lsq
Block: regrid_smth
Block: regrid_smth_spher
Block: dblint
Post-processing (stage 2)...
Building modules...
Building module "dfitpack"...
Constructing wrapper function "splev"...
y = splev(t,c,k,x,[e])
Constructing wrapper function "splder"...
y = splder(t,c,k,x,[nu,e])
Creating wrapper for Fortran function "splint"("splint")...
Constructing wrapper function "splint"...
splint = splint(t,c,k,a,b)
Constructing wrapper function "sproot"...
zero,m,ier = sproot(t,c,[mest])
Constructing wrapper function "spalde"...
d,ier = spalde(t,c,k,x)
Constructing wrapper function "curfit"...
n,c,fp,ier = curfit(iopt,x,y,w,t,wrk,iwrk,[xb,xe,k,s])
Constructing wrapper function "percur"...
n,c,fp,ier = percur(iopt,x,y,w,t,wrk,iwrk,[k,s])
Constructing wrapper function "parcur"...
n,c,fp,ier = parcur(iopt,ipar,idim,u,x,w,ub,ue,t,wrk,iwrk,[k,s])
Constructing wrapper function "fpcurf0"...
x,y,w,xb,xe,k,s,n,t,c,fp,fpint,nrdata,ier =
fpcurf0(x,y,k,[w,xb,xe,s,nest])
Constructing wrapper function "fpcurf1"...
x,y,w,xb,xe,k,s,n,t,c,fp,fpint,nrdata,ier =
fpcurf1(x,y,w,xb,xe,k,s,n,t,c,fp,fpint,nrdata,ier,[overwrite_x,overwrite_y,overwrite_w,overwrite_t,overwrite_c,overwrite_fpint,overwrite_nrdata])
Constructing wrapper function "fpcurfm1"...
x,y,w,xb,xe,k,s,n,t,c,fp,fpint,nrdata,ier =
fpcurfm1(x,y,k,t,[w,xb,xe,overwrite_t])
Constructing wrapper function "bispev"...
z,ier = bispev(tx,ty,c,kx,ky,x,y)
Constructing wrapper function "bispeu"...
z,ier = bispeu(tx,ty,c,kx,ky,x,y)
Constructing wrapper function "surfit_smth"...
nx,tx,ny,ty,c,fp,wrk1,ier =
surfit_smth(x,y,z,[w,xb,xe,yb,ye,kx,ky,s,nxest,nyest,eps,lwrk2])
Constructing wrapper function "surfit_lsq"...
tx,ty,c,fp,ier =
surfit_lsq(x,y,z,tx,ty,[w,xb,xe,yb,ye,kx,ky,eps,lwrk2,overwrite_tx,overwrite_ty])
Constructing wrapper function "spherfit_smth"...
nt,tt,np,tp,c,fp,ier = spherfit_smth(teta,phi,r,[w,s,eps])
Constructing wrapper function "spherfit_lsq"...
tt,tp,c,fp,ier =
spherfit_lsq(teta,phi,r,tt,tp,[w,eps,overwrite_tt,overwrite_tp])
Constructing wrapper function "regrid_smth"...
nx,tx,ny,ty,c,fp,ier = regrid_smth(x,y,z,[xb,xe,yb,ye,kx,ky,s])
Constructing wrapper function "regrid_smth_spher"...
nu,tu,nv,tv,c,fp,ier =
regrid_smth_spher(iopt,ider,u,v,r,[r0,r1,s])
Creating wrapper for Fortran function "dblint"("dblint")...
Constructing wrapper function "dblint"...
dblint = dblint(tx,ty,c,kx,ky,xb,xe,yb,ye)
Wrote C/API module "dfitpack" to file
"build/src.macosx-10.6-intel-2.7/scipy/interpolate/src/dfitpackmodule.c"
Fortran 77 wrappers are saved to
"build/src.macosx-10.6-intel-2.7/scipy/interpolate/src/dfitpack-f2pywrappers.f"
adding 'build/src.macosx-10.6-intel-2.7/fortranobject.c' to sources.
adding 'build/src.macosx-10.6-intel-2.7' to include_dirs.
adding
'build/src.macosx-10.6-intel-2.7/scipy/interpolate/src/dfitpack-f2pywrappers.f'
to sources.
building extension "scipy.interpolate._interpolate" sources
building extension "scipy.io.matlab.streams" sources
building extension "scipy.io.matlab.mio_utils" sources
building extension "scipy.io.matlab.mio5_utils" sources
building extension "scipy.lib.blas.fblas" sources
creating build/src.macosx-10.6-intel-2.7/scipy/lib
creating build/src.macosx-10.6-intel-2.7/scipy/lib/blas
from_template:> build/src.macosx-10.6-intel-2.7/scipy/lib/blas/fblas.pyf
('Including file', 'scipy/lib/blas/fblas_l1.pyf.src')
('Including file', 'scipy/lib/blas/fblas_l2.pyf.src')
('Including file', 'scipy/lib/blas/fblas_l3.pyf.src')
Mismatch in number of replacements (base <prefix=s,d,c,z>) for <__l1=->.
Ignoring.
conv_template:>
build/src.macosx-10.6-intel-2.7/scipy/lib/blas/fblaswrap_veclib_c.c
creating build/src.macosx-10.6-intel-2.7/build
creating build/src.macosx-10.6-intel-2.7/build/src.macosx-10.6-intel-2.7
creating
build/src.macosx-10.6-intel-2.7/build/src.macosx-10.6-intel-2.7/scipy
creating
build/src.macosx-10.6-intel-2.7/build/src.macosx-10.6-intel-2.7/scipy/lib
creating
build/src.macosx-10.6-intel-2.7/build/src.macosx-10.6-intel-2.7/scipy/lib/blas
f2py options: []
f2py: build/src.macosx-10.6-intel-2.7/scipy/lib/blas/fblas.pyf
Reading fortran codes...
Reading file 'build/src.macosx-10.6-intel-2.7/scipy/lib/blas/fblas.pyf'
(format:free)
Post-processing...
Block: fblas
Block: srotg
Block: drotg
Block: crotg
Block: zrotg
Block: srotmg
Block: drotmg
Block: srot
Block: drot
Block: csrot
Block: zdrot
Block: srotm
Block: drotm
Block: sswap
Block: dswap
Block: cswap
Block: zswap
Block: sscal
Block: dscal
Block: cscal
Block: zscal
Block: csscal
Block: zdscal
Block: scopy
Block: dcopy
Block: ccopy
Block: zcopy
Block: saxpy
Block: daxpy
Block: caxpy
Block: zaxpy
Block: sdot
Block: ddot
Block: cdotu
Block: zdotu
Block: cdotc
Block: zdotc
Block: snrm2
Block: dnrm2
Block: scnrm2
Block: dznrm2
Block: sasum
Block: dasum
Block: scasum
Block: dzasum
Block: isamax
Block: idamax
Block: icamax
Block: izamax
Block: sgemv
Block: dgemv
Block: cgemv
Block: zgemv
Block: ssymv
Block: dsymv
Block: chemv
Block: zhemv
Block: strmv
Block: dtrmv
Block: ctrmv
Block: ztrmv
Block: sger
Block: dger
Block: cgeru
Block: zgeru
Block: cgerc
Block: zgerc
Block: sgemm
Block: dgemm
Block: cgemm
Block: zgemm
Post-processing (stage 2)...
Building modules...
Building module "fblas"...
Constructing wrapper function "srotg"...
c,s = srotg(a,b)
Constructing wrapper function "drotg"...
c,s = drotg(a,b)
Constructing wrapper function "crotg"...
c,s = crotg(a,b)
Constructing wrapper function "zrotg"...
c,s = zrotg(a,b)
Constructing wrapper function "srotmg"...
param = srotmg(d1,d2,x1,y1)
Constructing wrapper function "drotmg"...
param = drotmg(d1,d2,x1,y1)
Constructing wrapper function "srot"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y =
srot(x,y,c,s,[n,offx,incx,offy,incy,overwrite_x,overwrite_y])
Constructing wrapper function "drot"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y =
drot(x,y,c,s,[n,offx,incx,offy,incy,overwrite_x,overwrite_y])
Constructing wrapper function "csrot"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y =
csrot(x,y,c,s,[n,offx,incx,offy,incy,overwrite_x,overwrite_y])
Constructing wrapper function "zdrot"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y =
zdrot(x,y,c,s,[n,offx,incx,offy,incy,overwrite_x,overwrite_y])
Constructing wrapper function "srotm"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y =
srotm(x,y,param,[n,offx,incx,offy,incy,overwrite_x,overwrite_y])
Constructing wrapper function "drotm"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y =
drotm(x,y,param,[n,offx,incx,offy,incy,overwrite_x,overwrite_y])
Constructing wrapper function "sswap"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = sswap(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "dswap"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = dswap(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "cswap"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = cswap(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "zswap"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
x,y = zswap(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "sscal"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = sscal(a,x,[n,offx,incx])
Constructing wrapper function "dscal"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = dscal(a,x,[n,offx,incx])
Constructing wrapper function "cscal"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = cscal(a,x,[n,offx,incx])
Constructing wrapper function "zscal"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = zscal(a,x,[n,offx,incx])
Constructing wrapper function "csscal"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = csscal(a,x,[n,offx,incx,overwrite_x])
Constructing wrapper function "zdscal"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = zdscal(a,x,[n,offx,incx,overwrite_x])
Constructing wrapper function "scopy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = scopy(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "dcopy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = dcopy(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "ccopy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = ccopy(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "zcopy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
y = zcopy(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "saxpy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
z = saxpy(x,y,[n,a,offx,incx,offy,incy])
Constructing wrapper function "daxpy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
z = daxpy(x,y,[n,a,offx,incx,offy,incy])
Constructing wrapper function "caxpy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
z = caxpy(x,y,[n,a,offx,incx,offy,incy])
Constructing wrapper function "zaxpy"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
z = zaxpy(x,y,[n,a,offx,incx,offy,incy])
Creating wrapper for Fortran function "sdot"("sdot")...
Constructing wrapper function "sdot"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xy = sdot(x,y,[n,offx,incx,offy,incy])
Creating wrapper for Fortran function "ddot"("ddot")...
Constructing wrapper function "ddot"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xy = ddot(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "cdotu"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xy = cdotu(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "zdotu"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xy = zdotu(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "cdotc"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xy = cdotc(x,y,[n,offx,incx,offy,incy])
Constructing wrapper function "zdotc"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
getarrdims:warning: assumed shape array, using 0 instead of '*'
xy = zdotc(x,y,[n,offx,incx,offy,incy])
Creating wrapper for Fortran function "snrm2"("snrm2")...
Constructing wrapper function "snrm2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
n2 = snrm2(x,[n,offx,incx])
Creating wrapper for Fortran function "dnrm2"("dnrm2")...
Constructing wrapper function "dnrm2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
n2 = dnrm2(x,[n,offx,incx])
Creating wrapper for Fortran function "scnrm2"("scnrm2")...
Constructing wrapper function "scnrm2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
n2 = scnrm2(x,[n,offx,incx])
Creating wrapper for Fortran function "dznrm2"("dznrm2")...
Constructing wrapper function "dznrm2"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
n2 = dznrm2(x,[n,offx,incx])
Creating wrapper for Fortran function "sasum"("sasum")...
Constructing wrapper function "sasum"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
s = sasum(x,[n,offx,incx])
Creating wrapper for Fortran function "dasum"("dasum")...
Constructing wrapper function "dasum"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
s = dasum(x,[n,offx,incx])
Creating wrapper for Fortran function "scasum"("scasum")...
Constructing wrapper function "scasum"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
s = scasum(x,[n,offx,incx])
Creating wrapper for Fortran function "dzasum"("dzasum")...
Constructing wrapper function "dzasum"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
s = dzasum(x,[n,offx,incx])
Constructing wrapper function "isamax"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
k = isamax(x,[n,offx,incx])
Constructing wrapper function "idamax"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
k = idamax(x,[n,offx,incx])
Constructing wrapper function "icamax"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
k = icamax(x,[n,offx,incx])
Constructing wrapper function "izamax"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
k = izamax(x,[n,offx,incx])
Constructing wrapper function "sgemv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y =
sgemv(alpha,a,x,[beta,y,offx,incx,offy,incy,trans,overwrite_y])
Constructing wrapper function "dgemv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y =
dgemv(alpha,a,x,[beta,y,offx,incx,offy,incy,trans,overwrite_y])
Constructing wrapper function "cgemv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y =
cgemv(alpha,a,x,[beta,y,offx,incx,offy,incy,trans,overwrite_y])
Constructing wrapper function "zgemv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y =
zgemv(alpha,a,x,[beta,y,offx,incx,offy,incy,trans,overwrite_y])
Constructing wrapper function "ssymv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y =
ssymv(alpha,a,x,[beta,y,offx,incx,offy,incy,lower,overwrite_y])
Constructing wrapper function "dsymv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y =
dsymv(alpha,a,x,[beta,y,offx,incx,offy,incy,lower,overwrite_y])
Constructing wrapper function "chemv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y =
chemv(alpha,a,x,[beta,y,offx,incx,offy,incy,lower,overwrite_y])
Constructing wrapper function "zhemv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
y =
zhemv(alpha,a,x,[beta,y,offx,incx,offy,incy,lower,overwrite_y])
Constructing wrapper function "strmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = strmv(a,x,[offx,incx,lower,trans,unitdiag,overwrite_x])
Constructing wrapper function "dtrmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = dtrmv(a,x,[offx,incx,lower,trans,unitdiag,overwrite_x])
Constructing wrapper function "ctrmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = ctrmv(a,x,[offx,incx,lower,trans,unitdiag,overwrite_x])
Constructing wrapper function "ztrmv"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
x = ztrmv(a,x,[offx,incx,lower,trans,unitdiag,overwrite_x])
Constructing wrapper function "sger"...
a =
sger(alpha,x,y,[incx,incy,a,overwrite_x,overwrite_y,overwrite_a])
Constructing wrapper function "dger"...
a =
dger(alpha,x,y,[incx,incy,a,overwrite_x,overwrite_y,overwrite_a])
Constructing wrapper function "cgeru"...
a =
cgeru(alpha,x,y,[incx,incy,a,overwrite_x,overwrite_y,overwrite_a])
Constructing wrapper function "zgeru"...
a =
zgeru(alpha,x,y,[incx,incy,a,overwrite_x,overwrite_y,overwrite_a])
Constructing wrapper function "cgerc"...
a =
cgerc(alpha,x,y,[incx,incy,a,overwrite_x,overwrite_y,overwrite_a])
Constructing wrapper function "zgerc"...
a =
zgerc(alpha,x,y,[incx,incy,a,overwrite_x,overwrite_y,overwrite_a])
Constructing wrapper function "sgemm"...
c = sgemm(alpha,a,b,[beta,c,trans_a,trans_b,overwrite_c])
Constructing wrapper function "dgemm"...
c = dgemm(alpha,a,b,[beta,c,trans_a,trans_b,overwrite_c])
Constructing wrapper function "cgemm"...
c = cgemm(alpha,a,b,[beta,c,trans_a,trans_b,overwrite_c])
Constructing wrapper function "zgemm"...
c = zgemm(alpha,a,b,[beta,c,trans_a,trans_b,overwrite_c])
Wrote C/API module "fblas" to file
"build/src.macosx-10.6-intel-2.7/build/src.macosx-10.6-intel-2.7/scipy/lib/blas/fblasmodule.c"
Fortran 77 wrappers are saved to
"build/src.macosx-10.6-intel-2.7/build/src.macosx-10.6-intel-2.7/scipy/lib/blas/fblas-f2pywrappers.f"
adding 'build/src.macosx-10.6-intel-2.7/fortranobject.c' to sources.
adding 'build/src.macosx-10.6-intel-2.7' to include_dirs.
adding
'build/src.macosx-10.6-intel-2.7/build/src.macosx-10.6-intel-2.7/scipy/lib/blas/fblas-f2pywrappers.f'
to sources.
building extension "scipy.lib.blas.cblas" sources
adding 'build/src.macosx-10.6-intel-2.7/scipy/lib/blas/cblas.pyf' to
sources.
f2py options: []
f2py: build/src.macosx-10.6-intel-2.7/scipy/lib/blas/cblas.pyf
Reading fortran codes...
Reading file 'build/src.macosx-10.6-intel-2.7/scipy/lib/blas/cblas.pyf'
(format:free)
Post-processing...
Block: cblas
Block: empty_module
Post-processing (stage 2)...
Building modules...
Building module "cblas"...
Constructing wrapper function "empty_module"...
empty_module()
Wrote C/API module "cblas" to file
"build/src.macosx-10.6-intel-2.7/build/src.macosx-10.6-intel-2.7/scipy/lib/blas/cblasmodule.c"
adding 'build/src.macosx-10.6-intel-2.7/fortranobject.c' to sources.
adding 'build/src.macosx-10.6-intel-2.7' to include_dirs.
building extension "scipy.lib.lapack.flapack" sources
creating build/src.macosx-10.6-intel-2.7/scipy/lib/lapack
from_template:> build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf
('Including file', 'scipy/lib/lapack/flapack_user.pyf.src')
('Including file', 'scipy/lib/lapack/flapack_le.pyf.src')
('Including file', 'scipy/lib/lapack/flapack_lls.pyf.src')
('Including file', 'scipy/lib/lapack/flapack_esv.pyf.src')
('Including file', 'scipy/lib/lapack/flapack_gesv.pyf.src')
('Including file', 'scipy/lib/lapack/flapack_lec.pyf.src')
('Including file', 'scipy/lib/lapack/flapack_llsc.pyf.src')
('Including file', 'scipy/lib/lapack/flapack_sevc.pyf.src')
('Including file', 'scipy/lib/lapack/flapack_evc.pyf.src')
('Including file', 'scipy/lib/lapack/flapack_svdc.pyf.src')
('Including file', 'scipy/lib/lapack/flapack_gsevc.pyf.src')
('Including file', 'scipy/lib/lapack/flapack_gevc.pyf.src')
('Including file', 'scipy/lib/lapack/flapack_aux.pyf.src')
creating
build/src.macosx-10.6-intel-2.7/build/src.macosx-10.6-intel-2.7/scipy/lib/lapack
f2py options: []
f2py: build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf
Reading fortran codes...
Reading file
'build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf' (format:free)
Line #1590 in build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:"
3*n-1"
crackline:3: No pattern for line
Line #1612 in build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:"
3*n-1"
crackline:3: No pattern for line
Line #1634 in build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:"
2*n-1"
crackline:3: No pattern for line
Line #1656 in build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:"
2*n-1"
crackline:3: No pattern for line
Line #1679 in build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:"
(compute_v?1+6*n+2*n*n:2*n+1)"
crackline:3: No pattern for line
Line #1704 in build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:"
(compute_v?1+6*n+2*n*n:2*n+1)"
crackline:3: No pattern for line
Line #1729 in build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:"
(compute_v?2*n+n*n:n+1)"
crackline:3: No pattern for line
Line #1754 in build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:"
(compute_v?2*n+n*n:n+1)"
crackline:3: No pattern for line
Line #2647 in build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:"
n"
crackline:3: No pattern for line
Line #2668 in build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:"
n"
crackline:3: No pattern for line
Line #2689 in build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:"
n"
crackline:3: No pattern for line
Line #2710 in build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:"
n"
crackline:3: No pattern for line
Post-processing...
Block: flapack
Block: gees__user__routines
Block: gees_user_interface
Block: sselect
Block: dselect
Block: cselect
Block: zselect
Block: sgesv
Block: dgesv
Block: cgesv
Block: zgesv
Block: sgbsv
Block: dgbsv
Block: cgbsv
Block: zgbsv
Block: sposv
Block: dposv
Block: cposv
Block: zposv
Block: sgelss
Block: dgelss
Block: cgelss
Block: zgelss
Block: ssyev
Block: dsyev
Block: cheev
Block: zheev
Block: ssyevd
Block: dsyevd
Block: cheevd
Block: zheevd
Block: ssyevr
Block: dsyevr
Block: cheevr
Block: zheevr
Block: sgees
In:
build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:flapack:unknown_interface:sgees
get_useparameters: no module gees__user__routines info used by sgees
Block: dgees
In:
build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:flapack:unknown_interface:dgees
get_useparameters: no module gees__user__routines info used by dgees
Block: cgees
In:
build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:flapack:unknown_interface:cgees
get_useparameters: no module gees__user__routines info used by cgees
Block: zgees
In:
build/src.macosx-10.6-intel-2.7/scipy/lib/lapack/flapack.pyf:flapack:unknown_interface:zgees
get_useparameters: no module gees__user__routines info used by zgees
Block: sgeev
Block: dgeev
Block: cgeev
Block: zgeev
Block: sgesdd
Block: dgesdd
Block: cgesdd
Block: zgesdd
Block: ssygv
Block: dsygv
Block: chegv
Block: zhegv
Block: ssygvd
Block: dsygvd
Block: chegvd
Block: zhegvd
Block: sggev
Block: dggev
Block: cggev
Block: zggev
Block: sgetrf
Block: dgetrf
Block: cgetrf
Block: zgetrf
Block: spotrf
Block: dpotrf
Block: cpotrf
Block: zpotrf
Block: sgetrs
Block: dgetrs
Block: cgetrs
Block: zgetrs
Block: spotrs
Block: dpotrs
Block: cpotrs
Block: zpotrs
Block: sgetri
Block: dgetri
Block: cgetri
Block: zgetri
Block: spotri
Block: dpotri
Block: cpotri
Block: zpotri
Block: strtri
Block: dtrtri
Block: ctrtri
Block: ztrtri
Block: sgeqrf
Block: dgeqrf
Block: cgeqrf
Block: zgeqrf
Block: sorgqr
Block: dorgqr
Block: cungqr
Block: zungqr
Block: sgehrd
Block: dgehrd
Block: cgehrd
Block: zgehrd
Block: sgebal
Block: dgebal
Block: cgebal
Block: zgebal
Block: slauum
Block: dlauum
Block: clauum
Block: zlauum
Block: slaswp
Block: dlaswp
Block: claswp
Block: zlaswp
Post-processing (stage 2)...
Building modules...
Constructing call-back function "cb_sselect_in_gees__user__routines"
def sselect(arg1,arg2): return sselect
Constructing call-back function "cb_dselect_in_gees__user__routines"
def dselect(arg1,arg2): return dselect
Constructing call-back function "cb_cselect_in_gees__user__routines"
def cselect(arg): return cselect
Constructing call-back function "cb_zselect_in_gees__user__routines"
def zselect(arg): return zselect
Building module "flapack"...
Constructing wrapper function "sgesv"...
lu,piv,x,info = sgesv(a,b,[overwrite_a,overwrite_b])
Constructing wrapper function "dgesv"...
lu,piv,x,info = dgesv(a,b,[overwrite_a,overwrite_b])
Constructing wrapper function "cgesv"...
lu,piv,x,info = cgesv(a,b,[overwrite_a,overwrite_b])
Constructing wrapper function "zgesv"...
lu,piv,x,info = zgesv(a,b,[overwrite_a,overwrite_b])
Constructing wrapper function "sgbsv"...
lub,piv,x,info = sgbsv(kl,ku,ab,b,[overwrite_ab,overwrite_b])
Constructing wrapper function "dgbsv"...
lub,piv,x,info = dgbsv(kl,ku,ab,b,[overwrite_ab,overwrite_b])
Constructing wrapper function "cgbsv"...
lub,piv,x,info = cgbsv(kl,ku,ab,b,[overwrite_ab,overwrite_b])
Constructing wrapper function "zgbsv"...
lub,piv,x,info = zgbsv(kl,ku,ab,b,[overwrite_ab,overwrite_b])
Constructing wrapper function "sposv"...
c,x,info = sposv(a,b,[lower,overwrite_a,overwrite_b])
Constructing wrapper function "dposv"...
c,x,info = dposv(a,b,[lower,overwrite_a,overwrite_b])
Constructing wrapper function "cposv"...
c,x,info = cposv(a,b,[lower,overwrite_a,overwrite_b])
Constructing wrapper function "zposv"...
c,x,info = zposv(a,b,[lower,overwrite_a,overwrite_b])
Constructing wrapper function "sgelss"...
v,x,s,rank,info = sgelss(a,b,[cond,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "dgelss"...
v,x,s,rank,info = dgelss(a,b,[cond,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "cgelss"...
v,x,s,rank,info = cgelss(a,b,[cond,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "zgelss"...
v,x,s,rank,info = zgelss(a,b,[cond,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "ssyev"...
w,v,info = ssyev(a,[compute_v,lower,lwork,overwrite_a])
Constructing wrapper function "dsyev"...
w,v,info = dsyev(a,[compute_v,lower,lwork,overwrite_a])
Constructing wrapper function "cheev"...
w,v,info = cheev(a,[compute_v,lower,lwork,overwrite_a])
Constructing wrapper function "zheev"...
w,v,info = zheev(a,[compute_v,lower,lwork,overwrite_a])
Constructing wrapper function "ssyevd"...
w,v,info = ssyevd(a,[compute_v,lower,lwork,overwrite_a])
Constructing wrapper function "dsyevd"...
w,v,info = dsyevd(a,[compute_v,lower,lwork,overwrite_a])
Constructing wrapper function "cheevd"...
w,v,info = cheevd(a,[compute_v,lower,lwork,overwrite_a])
Constructing wrapper function "zheevd"...
w,v,info = zheevd(a,[compute_v,lower,lwork,overwrite_a])
Constructing wrapper function "ssyevr"...
w,v,info =
ssyevr(a,[compute_v,lower,vrange,irange,atol,lwork,overwrite_a])
Constructing wrapper function "dsyevr"...
w,v,info =
dsyevr(a,[compute_v,lower,vrange,irange,atol,lwork,overwrite_a])
Constructing wrapper function "cheevr"...
w,v,info =
cheevr(a,[compute_v,lower,vrange,irange,atol,lwork,overwrite_a])
Constructing wrapper function "zheevr"...
w,v,info =
zheevr(a,[compute_v,lower,vrange,irange,atol,lwork,overwrite_a])
Constructing wrapper function "sgees"...
t,sdim,wr,wi,vs,info =
sgees(sselect,a,[compute_v,sort_t,lwork,sselect_extra_args,overwrite_a])
Constructing wrapper function "dgees"...
t,sdim,wr,wi,vs,info =
dgees(dselect,a,[compute_v,sort_t,lwork,dselect_extra_args,overwrite_a])
Constructing wrapper function "cgees"...
t,sdim,w,vs,info =
cgees(cselect,a,[compute_v,sort_t,lwork,cselect_extra_args,overwrite_a])
Constructing wrapper function "zgees"...
t,sdim,w,vs,info =
zgees(zselect,a,[compute_v,sort_t,lwork,zselect_extra_args,overwrite_a])
Constructing wrapper function "sgeev"...
wr,wi,vl,vr,info =
sgeev(a,[compute_vl,compute_vr,lwork,overwrite_a])
Constructing wrapper function "dgeev"...
wr,wi,vl,vr,info =
dgeev(a,[compute_vl,compute_vr,lwork,overwrite_a])
Constructing wrapper function "cgeev"...
w,vl,vr,info = cgeev(a,[compute_vl,compute_vr,lwork,overwrite_a])
Constructing wrapper function "zgeev"...
w,vl,vr,info = zgeev(a,[compute_vl,compute_vr,lwork,overwrite_a])
Constructing wrapper function "sgesdd"...
u,s,vt,info = sgesdd(a,[compute_uv,lwork,overwrite_a])
Constructing wrapper function "dgesdd"...
u,s,vt,info = dgesdd(a,[compute_uv,lwork,overwrite_a])
Constructing wrapper function "cgesdd"...
u,s,vt,info = cgesdd(a,[compute_uv,lwork,overwrite_a])
Constructing wrapper function "zgesdd"...
u,s,vt,info = zgesdd(a,[compute_uv,lwork,overwrite_a])
Constructing wrapper function "ssygv"...
w,v,info =
ssygv(a,b,[itype,compute_v,lower,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "dsygv"...
w,v,info =
dsygv(a,b,[itype,compute_v,lower,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "chegv"...
w,v,info =
chegv(a,b,[itype,compute_v,lower,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "zhegv"...
w,v,info =
zhegv(a,b,[itype,compute_v,lower,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "ssygvd"...
w,v,info =
ssygvd(a,b,[itype,compute_v,lower,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "dsygvd"...
w,v,info =
dsygvd(a,b,[itype,compute_v,lower,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "chegvd"...
w,v,info =
chegvd(a,b,[itype,compute_v,lower,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "zhegvd"...
w,v,info =
zhegvd(a,b,[itype,compute_v,lower,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "sggev"...
alphar,alphai,beta,vl,vr,info =
sggev(a,b,[compute_vl,compute_vr,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "dggev"...
alphar,alphai,beta,vl,vr,info =
dggev(a,b,[compute_vl,compute_vr,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "cggev"...
alpha,beta,vl,vr,info =
cggev(a,b,[compute_vl,compute_vr,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "zggev"...
alpha,beta,vl,vr,info =
zggev(a,b,[compute_vl,compute_vr,lwork,overwrite_a,overwrite_b])
Constructing wrapper function "sgetrf"...
lu,piv,info = sgetrf(a,[overwrite_a])
Constructing wrapper function "dgetrf"...
lu,piv,info = dgetrf(a,[overwrite_a])
Constructing wrapper function "cgetrf"...
lu,piv,info = cgetrf(a,[overwrite_a])
Constructing wrapper function "zgetrf"...
lu,piv,info = zgetrf(a,[overwrite_a])
Constructing wrapper function "spotrf"...
c,info = spotrf(a,[lower,clean,overwrite_a])
Constructing wrapper function "dpotrf"...
c,info = dpotrf(a,[lower,clean,overwrite_a])
Constructing wrapper function "cpotrf"...
c,info = cpotrf(a,[lower,clean,overwrite_a])
Constructing wrapper function "zpotrf"...
c,info = zpotrf(a,[lower,clean,overwrite_a])
Constructing wrapper function "sgetrs"...
x,info = sgetrs(lu,piv,b,[trans,overwrite_b])
Constructing wrapper function "dgetrs"...
x,info = dgetrs(lu,piv,b,[trans,overwrite_b])
Constructing wrapper function "cgetrs"...
x,info = cgetrs(lu,piv,b,[trans,overwrite_b])
Constructing wrapper function "zgetrs"...
x,info = zgetrs(lu,piv,b,[trans,overwrite_b])
Constructing wrapper function "spotrs"...
x,info = spotrs(c,b,[lower,overwrite_b])
Constructing wrapper function "dpotrs"...
x,info = dpotrs(c,b,[lower,overwrite_b])
Constructing wrapper function "cpotrs"...
x,info = cpotrs(c,b,[lower,overwrite_b])
Constructing wrapper function "zpotrs"...
x,info = zpotrs(c,b,[lower,overwrite_b])
Constructing wrapper function "sgetri"...
inv_a,info = sgetri(lu,piv,[lwork,overwrite_lu])
Constructing wrapper function "dgetri"...
inv_a,info = dgetri(lu,piv,[lwork,overwrite_lu])
Constructing wrapper function "cgetri"...
inv_a,info = cgetri(lu,piv,[lwork,overwrite_lu])
Constructing wrapper function "zgetri"...
inv_a,info = zgetri(lu,piv,[lwork,overwrite_lu])
Constructing wrapper function "spotri"...
inv_a,info = spotri(c,[lower,overwrite_c])
Constructing wrapper function "dpotri"...
inv_a,info = dpotri(c,[lower,overwrite_c])
Constructing wrapper function "cpotri"...
inv_a,info = cpotri(c,[lower,overwrite_c])
Constructing wrapper function "zpotri"...
inv_a,info = zpotri(c,[lower,overwrite_c])
Constructing wrapper function "strtri"...
inv_c,info = strtri(c,[lower,unitdiag,overwrite_c])
Constructing wrapper function "dtrtri"...
inv_c,info = dtrtri(c,[lower,unitdiag,overwrite_c])
Constructing wrapper function "ctrtri"...
inv_c,info = ctrtri(c,[lower,unitdiag,overwrite_c])
Constructing wrapper function "ztrtri"...
inv_c,info = ztrtri(c,[lower,unitdiag,overwrite_c])
Constructing wrapper function "sgeqrf"...
qr,tau,info = sgeqrf(a,[lwork,overwrite_a])
Constructing wrapper function "dgeqrf"...
qr,tau,info = dgeqrf(a,[lwork,overwrite_a])
Constructing wrapper function "cgeqrf"...
qr,tau,info = cgeqrf(a,[lwork,overwrite_a])
Constructing wrapper function "zgeqrf"...
qr,tau,info = zgeqrf(a,[lwork,overwrite_a])
Constructing wrapper function "sorgqr"...
q,info = sorgqr(qr,tau,[lwork,overwrite_qr,overwrite_tau])
Constructing wrapper function "dorgqr"...
q,info = dorgqr(qr,tau,[lwork,overwrite_qr,overwrite_tau])
Constructing wrapper function "cungqr"...
q,info = cungqr(qr,tau,[lwork,overwrite_qr,overwrite_tau])
Constructing wrapper function "zungqr"...
q,info = zungqr(qr,tau,[lwork,overwrite_qr,overwrite_tau])
Constructing wrapper function "sgehrd"...
ht,tau,info = sgehrd(a,[lo,hi,lwork,overwrite_a])
Constructing wrapper function "dgehrd"...
ht,tau,info = dgehrd(a,[lo,hi,lwork,overwrite_a])
Constructing wrapper function "cgehrd"...
ht,tau,info = cgehrd(a,[lo,hi,lwork,overwrite_a])
Constructing wrapper function "zgehrd"...
ht,tau,info = zgehrd(a,[lo,hi,lwork,overwrite_a])
Constructing wrapper function "sgebal"...
ba,lo,hi,pivscale,info = sgebal(a,[scale,permute,overwrite_a])
Constructing wrapper function "dgebal"...
ba,lo,hi,pivscale,info = dgebal(a,[scale,permute,overwrite_a])
Constructing wrapper function "cgebal"...
ba,lo,hi,pivscale,info = cgebal(a,[scale,permute,overwrite_a])
Constructing wrapper function "zgebal"...
ba,lo,hi,pivscale,info = zgebal(a,[scale,permute,overwrite_a])
Constructing wrapper function "slauum"...
a,info = slauum(c,[lower,overwrite_c])
Constructing wrapper function "dlauum"...
a,info = dlauum(c,[lower,overwrite_c])
Constructing wrapper function "clauum"...
a,info = clauum(c,[lower,overwrite_c])
Constructing wrapper function "zlauum"...
a,info = zlauum(c,[lower,overwrite_c])
Constructing wrapper function "slaswp"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = slaswp(a,piv,[k1,k2,off,inc,overwrite_a])
Constructing wrapper function "dlaswp"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = dlaswp(a,piv,[k1,k2,off,inc,overwrite_a])
Constructing wrapper function "claswp"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = claswp(a,piv,[k1,k2,off,inc,overwrite_a])
Constructing wrapper function "zlaswp"...
getarrdims:warning: assumed shape array, using 0 instead of '*'
a = zlaswp(a,piv,[k1,k2,off,inc,overwrite_a])