Re: [bug #21869] test_m61_exp_data_to_m61 fails in parallel -- March 27, 2014

Hi Justin,

Thanks for the bug report, I'm trying to come up with a solution for
this nightmare of a test.  Just as a side note, from the information
printout I can see that you have relax installed into the Python
site-packages directory.  But I have not designed relax as a Python
site-package, it is not possible to run 'import relax' from within
Python.  Do you know how relax got there?

Cheers,

Edward



On 27 March 2014 16:12, Justin <NO-REPLY.INVALID-ADDRESS@xxxxxxx> wrote:

Follow-up Comment #3, bug #21869 (project relax):

2 additional test didn't show this error. I just reported this to be sure
there isn't a flaw in the code producing wrong values.




                                            relax 3.1.7

                              Molecular dynamics by NMR data analysis

                             Copyright (C) 2001-2006 Edward d'Auvergne
                         Copyright (C) 2006-2014 the relax development team

This is free software which you are welcome to modify and redistribute under
the conditions of the
GNU General Public License (GPL).  This program, including all modules, is
licensed under the GPL
and comes with absolutely no warranty.  For details type 'GPL' within the
relax prompt.

Assistance in using the relax prompt and scripting interface can be accessed
by typing 'help' within
the prompt.

Processor fabric:  Uni-processor.


Hardware information:
    Machine:                 x86_64
    Processor:               Intel(R) Core(TM) i7-2600 CPU @ 3.40GHz
    Processor name:          Intel(R) Core(TM) i7-2600 CPU @ 3.40GHz
    Endianness:              little
    Total RAM size:          16081 Mb
    Total swap size:         4095 Mb

Operating system information:
    System:                  Linux
    Release:                 3.13.7-lh
    Version:                 #2 SMP PREEMPT Tue Mar 25 08:09:52 CET 2014
    GNU/Linux version:       Gentoo Base System 2.2
    Distribution:            gentoo 2.2
    Full platform string:
Linux-3.13.7-lh-x86_64-Intel-R-_Core-TM-_i7-2600_CPU_@_3.40GHz-with-gentoo-2.2

Python information:
    Architecture:            64bit ELF
    Python version:          2.7.6
    Python branch:
    Python build:            default, Jan 27 2014 11:46:31
    Python compiler:         GCC 4.8.2
    Libc version:            glibc 2.2.5
    Python implementation:   CPython
    Python revision:
    Python executable:       /usr/bin/python2.7
    Python flags:            sys.flags(debug=0, py3k_warning=0,
division_warning=0, division_new=0, inspect=0, interactive=0, optimize=0,
dont_write_bytecode=0, no_user_site=0, no_site=0, ignore_environment=0,
tabcheck=0, verbose=0, unicode=0, bytes_warning=0, hash_randomization=0)
    Python float info:       sys.float_info(max=1.7976931348623157e+308,
max_exp=1024, max_10_exp=308, min=2.2250738585072014e-308, min_exp=-1021,
min_10_exp=-307, dig=15, mant_dig=53, epsilon=2.220446049250313e-16, 
radix=2,
rounds=1)
    Python module path:      ['', 
'/usr/lib64/python2.7/site-packages/relax',
'/usr/lib64/python27.zip', '/usr/lib64/python2.7',
'/usr/lib64/python2.7/plat-linux2', '/usr/lib64/python2.7/lib-tk',
'/usr/lib64/python2.7/lib-old', '/usr/lib64/python2.7/lib-dynload',
'/usr/lib64/python2.7/site-packages',
'/usr/lib64/python2.7/site-packages/gst-0.10',
'/usr/lib64/python2.7/site-packages/gtk-2.0',
'/usr/lib64/python2.7/site-packages/wx-3.0-gtk2']

Python packages and modules (most are optional):

Name               Installed    Version                   Path

minfx              True         1.0.5
/usr/lib64/python2.7/site-packages/minfx
bmrblib            True         1.0.3
/usr/lib64/python2.7/site-packages/bmrblib
numpy              True         1.8.0
/usr/lib64/python2.7/site-packages/numpy
scipy              True         0.13.3
/usr/lib64/python2.7/site-packages/scipy
wxPython           True         3.0.0.0 gtk2 (classic)
/usr/lib64/python2.7/site-packages/wx-3.0-gtk2/wx
mpi4py             True         1.3.1
/usr/lib64/python2.7/site-packages/mpi4py
epydoc             False

optparse           True         1.5.3
/usr/lib64/python2.7/optparse.pyc
readline           True
/usr/lib64/python2.7/lib-dynload/readline.so
profile            True
/usr/lib64/python2.7/profile.pyc
bz2                True
/usr/lib64/python2.7/lib-dynload/bz2.so
gzip               True
/usr/lib64/python2.7/gzip.pyc
io                 True
/usr/lib64/python2.7/io.pyc
xml                True         0.8.4 (internal)
/usr/lib64/python2.7/xml/__init__.pyc
xml.dom.minidom    True
/usr/lib64/python2.7/xml/dom/minidom.pyc

relax information:
    Version:                 3.1.7
    Processor fabric:        Uni-processor.

relax C modules:

Module                        Compiled    File type
                                                   Path

target_functions.relax_fit    True        ELF 64-bit LSB shared object,
x86-64, version 1 (SYSV), dynamically linked, stripped
/usr/lib64/python2.7/site-packages/relax/target_functions/relax_fit.so




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Re: [bug #21869] test_m61_exp_data_to_m61 fails in parallel

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