Trouble with sample scripts
Posted by Alexandar Hansen on September 25, 2006 - 23:27:
Hello,
I'm having trouble running sample scripts that involve the model selection. For instance, when I try to run the Full_Analysis.py, after copying everything from /test_suite/data/model_free/S2...etc./ into the relax directory, it fails at the end and gives me this:
relax> model_selection(method='AIC', modsel_run='aic', runs=None)
AIC model selection.
Traceback (most recent call last):
File "relax", line 442, in ?
Relax()
File "relax", line 159, in __init__
self.interpreter.run()
File "/local/home/viochem/Programs/Relax/relax-1.2.7/prompt/interpreter.py", line 213, in run
run_script(intro=self.relax.intro_string, local=self.local, script_file=self.relax.script_file
, quit=1)
File "/local/home/viochem/Programs/Relax/relax-1.2.7/prompt/interpreter.py", line 388, in run_script
console.interact(intro, local, script_file, quit)
File "/local/home/viochem/Programs/Relax/relax-
1.2.7/prompt/interpreter.py", line 340, in interact_script
execfile(script_file, local)
File "full_analysis.py", line 415, in ?
Main()
File "full_analysis.py", line 145, in __init__
self.model_selection(run='aic', dir=self.base_dir + 'aic')
File "full_analysis.py", line 352, in model_selection
model_selection('AIC', run)
File "/local/home/viochem/Programs/Relax/relax-
1.2.7/prompt/model_selection.py", line 121, in model_selection
self.relax.generic.model_selection.select(method=method, modsel_run=modsel_run, runs=runs)
File "/local/home/viochem/Programs/Relax/relax-
1.2.7/generic_fns/model_selection.py", line 162, in select
for i in xrange(self.min_instances):
TypeError: an integer is required
I've tried this with relax ver. 1.2.7 and the "repository checkout" version that is downloaded when using svn. Does anyone have suggestions or comments of what I might be doing wrong? Likely it's something obvious that I'm just missing.
Alex Hansen
Powered by
MHonArc, Updated Thu Sep 28 09:01:15 2006