mailRe: Spectral Density Mapping Problem


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Posted by Sébastien Morin on March 25, 2008 - 17:40:
Hi Johnny !

I would be helpful if you could post, let's say, the first 10 lines of each input file as well as the complete script you used.

Moreover, it could be also useful to know which version of relax you use...

Cheers !


Séb  :)



Johnny Croy wrote:
Hello,

I am new to using relax, but I have been running into a problem with reading data into relax using the jw_mapping.py sample script. I have three separate files for noe, r1 and r2 all collected at 500 MHZ. These are tab delimitated files that contain residue #, residue name, value and error in columns 0-3, respectively. Also a file containing the sequence, residue # and name in cols 0 and 1, respectively was generated. These files were substituted into the script in the appropriate places and frequencies were changed. When the script is invoked using 'relax jw_mapping.py' it runs through to the end displaying the grace plots and the appropriate output files are created. However, only the first residue in the file is analyzed. How do I tell relax to read in the whole list?

Thanks in advance for your help!

Best regards,

Johnny Croy
CU Boulder

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