Hi Troels,
You have the mac app relax 3.5 installed ?
I have the 3.1.5
Then relax is only reached in the GUI i think. :-)
I can make an alias in my .cshrc that points to the GUI, but it does not make
sense to use it in place of double clicking the relax butterfly icon
To run the systemtests, then do:
Tools -> System tests
Those commands would be:
Tools -> System information
Copy paste the info from the output of the relax controller to a file.
When relax hits an error, it will show which test is wrong, and it should
be possible to pin-point what is wrong.
Files attached. Please let me know.
Stefano
=============
= GUI tests =
=============
....................................................................
----------------------------------------------------------------------
Ran 68 tests in 303.889s
OK
===================================
= Summary of the relax test suite =
===================================
Optional packages/modules
=========================
No tests skipped due to missing modules.
Synopsis
========
GUI tests
...................................................................................
[ OK ]
==============
= Unit tests =
==============
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................
----------------------------------------------------------------------
Ran 1272 tests in 66.655s
OK
===================================
= Summary of the relax test suite =
===================================
Optional packages/modules
=========================
No tests skipped due to missing modules.
Synopsis
========
Unit tests
..................................................................................
[ OK ]
relax 3.1.5
Molecular dynamics by NMR data analysis
Copyright (C) 2001-2006 Edward d'Auvergne
Copyright (C) 2006-2014 the relax development team
This is free software which you are welcome to modify and redistribute under
the conditions of the
GNU General Public License (GPL). This program, including all modules, is
licensed under the GPL
and comes with absolutely no warranty. For details type 'GPL' within the
relax prompt.
Assistance in using the relax prompt and scripting interface can be accessed
by typing 'help' within
the prompt.
Processor fabric: Uni-processor.
=============================
= System / functional tests =
=============================
....................................................................E...............................................................................................................................................................................................................................................................................................
======================================================================
ERROR: test_generate_rotor2_distribution
(test_suite.system_tests.frame_order.Frame_order)
Generate the rotor2 distribution of CaM.
----------------------------------------------------------------------
relax 3.1.5
Molecular dynamics by NMR data analysis
Copyright (C) 2001-2006 Edward d'Auvergne
Copyright (C) 2006-2014 the relax development team
This is free software which you are welcome to modify and redistribute under
the conditions of the
GNU General Public License (GPL). This program, including all modules, is
licensed under the GPL
and comes with absolutely no warranty. For details type 'GPL' within the
relax prompt.
Assistance in using the relax prompt and scripting interface can be accessed
by typing 'help' within
the prompt.
Processor fabric: Uni-processor.
Traceback (most recent call last):
File "test_suite/system_tests/frame_order.pyc", line 645, in
test_generate_rotor2_distribution
File "prompt/interpreter.pyc", line 278, in run
File "prompt/interpreter.pyc", line 576, in run_script
File "prompt/interpreter.pyc", line 468, in interact_script
File "prompt/interpreter.pyc", line 341, in exec_script
File "runpy.pyc", line 180, in run_module
File "runpy.pyc", line 72, in _run_code
File
"/Applications/relax.app/Contents/Resources/test_suite/system_tests/scripts/frame_order/cam/generate_rotor2_distribution.py",
line 15, in <module>
ImportError: No module named shared_data.frame_order.cam.generate_base
----------------------------------------------------------------------
Ran 356 tests in 1237.160s
FAILED (errors=1)
===================================
= Summary of the relax test suite =
===================================
Optional packages/modules
=========================
No tests skipped due to missing modules.
Synopsis
========
System/functional tests
................................................................. [ Failed ]
relax> sys_info()
Hardware information:
Machine: i386
Processor: i386
Endianness: little
Total RAM size: ? Mb
Total swap size: ? Mb
Operating system information:
System: Darwin
Release: 10.8.0
Version: Darwin Kernel Version 10.8.0: Tue Jun 7
16:33:36 PDT 2011; root:xnu-1504.15.3~1/RELEASE_I386
Mac version: 10.6.8 (, , ) i386
Distribution:
Full platform string: Darwin-10.8.0-i386-64bit
Python information:
Architecture: 64bit
Python version: 2.7.5
Python branch:
Python build: default, Aug 8 2013 23:32:14
Python compiler: GCC 4.2.1 (Apple Inc. build 5666) (dot 3)
Libc version:
Python implementation: CPython
Python revision:
Python executable: /Applications/relax.app/Contents/MacOS/python
Python flags: sys.flags(debug=0, py3k_warning=0,
division_warning=0, division_new=0, inspect=0, interactive=0, optimize=0,
dont_write_bytecode=0, no_user_site=0, no_site=0, ignore_environment=0,
tabcheck=0, verbose=0, unicode=0, bytes_warning=0, hash_randomization=0)
Python float info: sys.float_info(max=1.7976931348623157e+308,
max_exp=1024, max_10_exp=308, min=2.2250738585072014e-308, min_exp=-1021,
min_10_exp=-307, dig=15, mant_dig=53, epsilon=2.220446049250313e-16, radix=2,
rounds=1)
Python module path: ['/Applications/relax.app/Contents/Resources',
'/Applications/relax.app/Contents/Resources/lib/python27.zip',
'/Applications/relax.app/Contents/Resources/lib/python2.7',
'/Applications/relax.app/Contents/Resources/lib/python2.7/plat-darwin',
'/Applications/relax.app/Contents/Resources/lib/python2.7/plat-mac',
'/Applications/relax.app/Contents/Resources/lib/python2.7/plat-mac/lib-scriptpackages',
'/Applications/relax.app/Contents/Resources/lib/python2.7/lib-tk',
'/Applications/relax.app/Contents/Resources/lib/python2.7/lib-old',
'/Applications/relax.app/Contents/Resources/lib/python2.7/lib-dynload',
'/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip',
'/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages',
'/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages']
Python packages and modules (most are optional):
Name Installed Version Path
minfx True 1.0.5
/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/minfx
bmrblib True 1.0.3
/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/bmrblib
numpy True 1.7.1
/Applications/relax.app/Contents/Resources/lib/python2.7/numpy
scipy True 0.12.0
/Applications/relax.app/Contents/Resources/lib/python2.7/scipy
wxPython True 2.9.4.1 osx-cocoa (classic)
/Applications/relax.app/Contents/Resources/lib/python2.7/wx
mpi4py True 1.3.1
/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/mpi4py
epydoc False
optparse True 1.5.3
/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/optparse.pyc
readline False
profile True
/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/profile.pyc
bz2 True
/Applications/relax.app/Contents/Resources/lib/python2.7/lib-dynload/bz2.so
gzip True
/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/gzip.pyc
io True
/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/io.pyc
xml True 0.8.4 (internal)
/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/xml/__init__.pyc
xml.dom.minidom True
/Applications/relax.app/Contents/Resources/lib/python2.7/site-packages.zip/xml/dom/minidom.pyc
relax information:
Version: 3.1.5
Processor fabric: Uni-processor.
relax C modules:
Module Compiled File type
Path
target_functions.relax_fit True 3-way bundle (i386, ppc, x86_64)
/Applications/relax.app/Contents/Resources/lib/python2.7/lib-dynload/target_functions/relax_fit.so
Re: tests