s2
(in lib.text.gui) |
setUp()
(in Test___init__) |
Spin_ctrl
(in gui.analyses.elements.spin_element) |
s2f
(in lib.text.gui) |
setUp()
(in Test___init__) |
spin_display_params()
(in Relax_disp_rep) |
s2s
(in lib.text.gui) |
setUp()
(in Test___init__) |
spin_element
(in gui.analyses.elements) |
SA_flag
(in minfx.generic) |
setUp()
(in Test___init__) |
spin_file_name()
(in specific_analyses.relax_disp.cpmgfit) |
safe_replacement()
(in Fetch_docstrings) |
setUp()
(in Test___init__) |
spin_has_frq_data()
(in specific_analyses.relax_disp.data) |
safeguard()
(in Exact_trust_region) |
setUp()
(in Test___init__) |
spin_id
(in gui.input_elements) |
same_sequence()
(in pipe_control.mol_res_spin) |
setUp()
(in Test_internal) |
Spin_id
(in gui.input_elements.spin_id) |
sample()
(in Stereochem_analysis) |
setUp()
(in Test___init__) |
spin_id_to_data_list()
(in lib.selection) |
sample_conditions
(in bmrblib.experimental_details) |
setUp()
(in Test_mol_res_spin) |
spin_id_variants()
(in pipe_control.mol_res_spin) |
sample_conditions_v2_1
(in bmrblib.experimental_details) |
setUp()
(in Test_pipes) |
spin_id_variants_cleanup()
(in pipe_control.mol_res_spin) |
sample_conditions_v3_1
(in bmrblib.experimental_details) |
setUp()
(in Test_selection) |
spin_id_variants_prune()
(in pipe_control.mol_res_spin) |
SampleConditionCitation
(in bmrblib.experimental_details.sample_conditions) |
setUp()
(in Test___init__) |
spin_ids_to_containers()
(in specific_analyses.relax_disp.data) |
SampleConditionCitation_v3_1
(in bmrblib.experimental_details.sample_conditions_v3_1) |
setUp()
(in Test___init__) |
spin_index_loop()
(in pipe_control.mol_res_spin) |
SampleConditionList
(in bmrblib.experimental_details.sample_conditions) |
setUp()
(in Test___init__) |
spin_isotope()
(in Auto_relax_disp) |
SampleConditionList_v2_1
(in bmrblib.experimental_details.sample_conditions_v2_1) |
setUp()
(in Test___init__) |
spin_isotope_heteronuc()
(in Auto_model_free) |
SampleConditionList_v3_1
(in bmrblib.experimental_details.sample_conditions_v3_1) |
setUp()
(in Test___init__) |
spin_isotope_proton()
(in Auto_model_free) |
SampleConditionsSaveframe
(in bmrblib.experimental_details.sample_conditions) |
setUp()
(in Test_api) |
spin_lock_field()
(in specific_analyses.relax_disp.data) |
SampleConditionsSaveframe_v2_1
(in bmrblib.experimental_details.sample_conditions_v2_1) |
setUp()
(in Test___init__) |
spin_lock_offset()
(in specific_analyses.relax_disp.data) |
SampleConditionsSaveframe_v3_1
(in bmrblib.experimental_details.sample_conditions_v3_1) |
setUp()
(in Test___init__) |
spin_loop()
(in pipe_control.mol_res_spin) |
SampleConditionVariable
(in bmrblib.experimental_details.sample_conditions) |
setUp()
(in Test___init__) |
spin_testing_base
(in test_suite.unit_tests) |
SampleConditionVariable_v2_1
(in bmrblib.experimental_details.sample_conditions_v2_1) |
setUp()
(in Test_data) |
spin_vars()
(in Spin) |
SampleConditionVariable_v3_1
(in bmrblib.experimental_details.sample_conditions_v3_1) |
setUp()
(in Test___init__) |
Spin_view_window
(in gui.spin_viewer.frame) |
save()
(in Free_file_format) |
setUp()
(in Test___init__) |
spin_viewer
(in gui) |
save()
(in Free_file_format_window) |
setUp()
(in Test___init__) |
SpinContainer
(in data_store.mol_res_spin) |
SAVE_ERROR_STATE
(in lib.errors) |
setUp()
(in Test_chi2) |
SpinList
(in data_store.mol_res_spin) |
save_state()
(in lib.errors) |
setUp()
(in Test_relax_fit) |
split()
(in SplitIO) |
save_state()
(in pipe_control.state) |
setUp()
(in Test___init__) |
split_refs()
(in About_base) |
SaveFrame
(in bmrblib.pystarlib) |
setUp()
(in Align_tensor_base_class) |
SplitIO
(in lib.io) |
SaveFrame
(in bmrblib.pystarlib.SaveFrame) |
setUp()
(in Diffusion_tensor_base_class) |
splitter
(in gui.spin_viewer) |
SaveFrameTest
(in bmrblib.pystarlib) |
setUp()
(in Minimisation_base_class) |
Square
(in lib.structure.cones) |
scale()
(in pipe_control.value) |
setUp()
(in Molecule_base_class) |
square_matrix_power()
(in lib.linear_algebra.matrix_power) |
scaling()
(in Param_list) |
setUp()
(in N_state_model_base_class) |
SRC_FILE
(in script-sconstruct) |
scan_paths()
(in Test_finder) |
setUp()
(in Relax_data_base_class) |
star_text()
(in File) |
school
(in dAuvergne06) |
setUp()
(in Residue_base_class) |
star_text()
(in SaveFrame) |
scipy_module
(in dep_check) |
setUp()
(in Sequence_base_class) |
star_text()
(in TagTable) |
| scons |
setUp()
(in Spin_base_class) |
Star_version
(in bmrblib.version) |
scope()
(in Param_list) |
setUp()
(in Structure_base_class) |
start()
(in relax) |
SCORE_GAP_PENALTY
(in lib.sequence_alignment.needleman_wunsch) |
setUp()
(in Value_base_class) |
StartingKey()
(in Delay_num_cell_editor) |
SCORE_MATCH
(in lib.sequence_alignment.needleman_wunsch) |
setUp()
(in Library) |
startTest()
(in RelaxTestResult) |
SCORE_MISMATCH
(in lib.sequence_alignment.needleman_wunsch) |
setup_bfgs()
(in Bfgs) |
state
(in pipe_control) |
SCORES
(in lib.sequence_alignment.needleman_wunsch) |
setup_bug_22146_unpacking_r2a_r2b_cluster()
(in Relax_disp) |
state
(in test_suite.gui_tests) |
script
(in lib.ansi) |
setup_conv_tests()
(in Min) |
State
(in test_suite.gui_tests.state) |
script
(in pipe_control) |
setup_data()
(in Exp) |
state
(in test_suite.system_tests) |
script
(in user_functions) |
setup_data()
(in Molecule_base_class) |
State
(in test_suite.system_tests.state) |
script()
(in pipe_control.exp_info) |
setup_data()
(in Residue_base_class) |
state
(in user_functions) |
script()
(in pipe_control.script) |
setup_dipole_pair()
(in Auto_model_free) |
State_base_class
(in test_suite.unit_tests.state_testing_base) |
| script-relax |
setup_equations()
(in Mf) |
state_load()
(in Main) |
| script-sconstruct |
setup_fail
(in Wiz_page) |
state_save()
(in Main) |
script_definitions()
(in Fetch_docstrings) |
setup_frame()
(in Metadata_window) |
state_testing_base
(in test_suite.unit_tests) |
script_exec()
(in GuiTestCase) |
setup_frame()
(in Controller) |
statistics
(in lib) |
script_exec()
(in SystemTestCase) |
setup_frame()
(in Export_bmrb_window) |
statistics
(in lib.structure) |
script_grace2images()
(in lib.plotting.grace) |
setup_frame()
(in Prompt) |
statistics
(in pipe_control) |
scripts
(in gui.components) |
setup_hansen_cpmg_data()
(in Relax_disp) |
statistics
(in user_functions) |
Scripts
(in gui.components.scripts) |
setup_hessian_mod()
(in Hessian_mods) |
status
(in auto_analyses.dauvergne_protocol) |
SCROLL_RATE
(in About_base) |
setup_identity()
(in Test_matrix_ops) |
status
(in auto_analyses.frame_order) |
se99
(in minfx.hessian_mods) |
setup_identity_free_rotor()
(in Test_matrix_ops) |
status
(in auto_analyses.noe) |
se99()
(in Hessian_mods) |
setup_korzhnev_2005_data()
(in Relax_disp) |
status
(in auto_analyses.relax_disp) |
se99()
(in minfx.hessian_mods.se99) |
setup_kteilum_fmpoulsen_makke_cpmg_data()
(in Relax_disp) |
status
(in auto_analyses.relax_disp_repeat_cpmg) |
search()
(in lib.regex) |
setup_line_search()
(in Line_search) |
status
(in auto_analyses.relax_fit) |
second_parse()
(in lib.software.xplor) |
setup_missing_r1_spins()
(in Relax_disp) |
status
(in auto_analyses.stereochem_analysis) |
SECTION
(in lib.text.string) |
setup_model()
(in Frame_order) |
status
(in data_store) |
section()
(in lib.text.sectioning) |
setup_newton()
(in Newton) |
status
(in gui.about) |
sectioning
(in lib.text) |
setup_page()
(in Wiz_window) |
status
(in gui.analyses.auto_model_free) |
seekable()
(in Bzip2Fixed) |
setup_paul_schanda_nov_2015()
(in Relax_disp) |
status
(in gui.analyses.auto_noe) |
seekable()
(in GzipFixed) |
setup_peak_intensity_type()
(in ExpInfo) |
status
(in gui.analyses.auto_relax_disp) |
segment_path()
(in test_suite.unit_tests.unit_test_runner) |
setup_pseudoatom_pcs()
(in pipe_control.pcs) |
status
(in gui.analyses.auto_rx_base) |
sel_all()
(in pipe_control.selection) |
setup_pseudoatom_rdc()
(in pipe_control.rdc) |
status
(in gui.analyses.elements.model_list) |
sel_domain()
(in pipe_control.selection) |
setup_r1rho_kjaergaard()
(in Relax_disp) |
status
(in gui.analyses.execute) |
sel_interatom()
(in pipe_control.selection) |
setup_script()
(in ExpInfo) |
status
(in gui.analyses.results_analysis) |
sel_read()
(in pipe_control.selection) |
setup_signal_noise_ratio()
(in Spectrum) |
status
(in gui.analyses) |
sel_spin()
(in pipe_control.selection) |
setup_sod1wt_t25()
(in Relax_disp) |
status
(in gui.components.base_list) |
select
(in user_functions) |
setup_thiol()
(in ExpInfo) |
status
(in gui.components.free_file_format) |
select()
(in pipe_control.model_selection) |
setup_tp02_data_to_ns_r1rho_2site()
(in Relax_disp) |
status
(in gui.components.grid) |
select_consist_test()
(in New_analysis_page) |
setup_window()
(in Spin_view_window) |
status
(in gui.components.molecule) |
select_custom()
(in New_analysis_page) |
SetValue()
(in Boolean_ctrl) |
status
(in gui.components.relax_data) |
select_disp()
(in New_analysis_page) |
SetValue()
(in Float_ctrl) |
status
(in gui.components.relax_data_meta) |
select_ellipsoid()
(in Protocol_mode_sel_window) |
SetValue()
(in Spin_ctrl) |
status
(in gui.components.spectrum) |
select_event()
(in RelaxDirDialog) |
SetValue()
(in Text_ctrl) |
status
(in gui.controller) |
select_event()
(in RelaxFileDialog) |
SetValue()
(in Free_file_format) |
status
(in gui.errors) |
select_file()
(in File_element) |
SetValue()
(in Selector_bool) |
status
(in gui.export_bmrb) |
select_final()
(in Protocol_mode_sel_window) |
SetValue()
(in Combo_list) |
status
(in gui.filedialog) |
select_full_analysis()
(in Protocol_mode_sel_window) |
SetValue()
(in Selector_dir) |
status
(in gui.fonts) |
select_local_tm()
(in Protocol_mode_sel_window) |
SetValue()
(in File_element) |
status
(in gui.icons) |
select_mf()
(in New_analysis_page) |
SetValue()
(in Selector_file) |
status
(in gui.input_elements.bool) |
select_model()
(in Auto_rx) |
SetValue()
(in Selector_file_multiple) |
status
(in gui.input_elements.dir) |
select_model()
(in specific_analyses.frame_order.uf) |
SetValue()
(in Selector_file_window) |
status
(in gui.input_elements.file) |
select_model()
(in specific_analyses.model_free.uf) |
SetValue()
(in Sequence) |
status
(in gui.input_elements.sequence) |
select_model()
(in specific_analyses.n_state_model.parameters) |
SetValue()
(in Sequence_window) |
status
(in gui.input_elements.sequence_2D) |
select_model()
(in specific_analyses.relax_disp.uf) |
SetValue()
(in Sequence_window_2D) |
status
(in gui.interpreter) |
select_model()
(in specific_analyses.relax_fit.uf) |
SetValue()
(in Spin_id) |
status
(in gui.menu) |
select_noe()
(in New_analysis_page) |
SetValue()
(in Value) |
status
(in gui.message) |
select_oblate()
(in Protocol_mode_sel_window) |
SetValue()
(in Force_true) |
status
(in gui.misc) |
select_prolate()
(in Protocol_mode_sel_window) |
SetValue()
(in Uf_page) |
status
(in gui.pipe_editor) |
select_r1()
(in New_analysis_page) |
sf
(in AllChecks) |
status
(in gui.relax_gui) |
select_r2()
(in New_analysis_page) |
sf_csa_read()
(in specific_analyses.model_free.bmrb) |
status
(in gui.relax_prompt) |
select_sphere()
(in Protocol_mode_sel_window) |
sf_label
(in ChemShiftAnisotropySaveframe) |
status
(in gui.results_viewer) |
select_spin()
(in Relax_disp_rep) |
sf_label
(in EntitySaveframe) |
status
(in gui.spin_viewer.frame) |
selection
(in lib) |
sf_label
(in EntitySaveframe_v2_1) |
status
(in gui.spin_viewer.tree) |
Selection
(in lib.selection) |
sf_label
(in CitationsSaveframe) |
status
(in gui) |
selection
(in lib.structure.internal) |
sf_label
(in ExperimentSaveframe) |
status
(in gui.string_conv) |
selection
(in pipe_control) |
sf_label
(in MethodSaveframe) |
status
(in gui.uf_objects) |
selection
(in test_suite.system_tests) |
sf_label
(in MethodSaveframe_v3_1) |
status
(in gui.wizards.peak_intensity) |
Selection
(in test_suite.system_tests.selection) |
sf_label
(in NMRSpectrometerSaveframe) |
status
(in gui.wizards.wiz_objects) |
selection()
(in Internal) |
sf_label
(in SampleConditionsSaveframe) |
status
(in Bieri11) |
selection_win_data()
(in Selector_file_multiple) |
sf_label
(in SoftwareSaveframe) |
status
(in Clore90) |
selection_win_data()
(in Sequence) |
sf_label
(in SoftwareSaveframe_v3_1) |
status
(in Delaglio95) |
selection_win_show()
(in Selector_file_multiple) |
sf_label
(in AutoRelaxationSaveframe) |
status
(in GoddardKneller) |
selection_win_show()
(in Sequence) |
sf_label
(in AutoRelaxationSaveframe_v3_1) |
status
(in LipariSzabo82a) |
selection_win_show()
(in Sequence_2D) |
sf_label
(in HeteronuclNOESaveframe_v2_1) |
status
(in LipariSzabo82b) |
Selector_bool
(in gui.input_elements.bool) |
sf_label
(in HeteronuclNOESaveframe_v3_1) |
status
(in Ref) |
Selector_dir
(in gui.input_elements.dir) |
sf_label
(in HeteronuclT1Saveframe_v2_1) |
status
(in dAuvergne06) |
Selector_file
(in gui.input_elements.file) |
sf_label
(in HeteronuclT1Saveframe_v3_1) |
status
(in dAuvergneGooley03) |
Selector_file_multiple
(in gui.input_elements.file) |
sf_label
(in HeteronuclT2Saveframe_v2_1) |
status
(in dAuvergneGooley06) |
Selector_file_window
(in gui.input_elements.file) |
sf_label
(in HeteronuclT2Saveframe_v3_1) |
status
(in dAuvergneGooley07) |
semicolon_block_collapse()
(in bmrblib.pystarlib.Text) |
sf_label
(in TensorSaveframe) |
status
(in dAuvergneGooley08a) |
semicolon_block_expand()
(in bmrblib.pystarlib.Text) |
sf_label
(in ModelFreeSaveframe) |
status
(in dAuvergneGooley08b) |
semicolon_block_replace()
(in bmrblib.pystarlib.Text) |
sf_label
(in ModelFreeSaveframe_v3_1) |
status
(in info) |
semicolons_add()
(in bmrblib.pystarlib.Text) |
sf_model_free_read()
(in specific_analyses.model_free.bmrb) |
status
(in pipe_control.bmrb) |
send_data_to_slaves()
(in Processor) |
sharp
(in bmrblib.pystarlib.Text) |
status
(in pipe_control.grace) |
send_data_to_slaves()
(in multi) |
sheet()
(in lib.structure.pdb_read) |
status
(in pipe_control.minimise) |
separator1
(in TextTestResult) |
sheet()
(in lib.structure.pdb_write) |
status
(in pipe_control.mol_res_spin) |
separator2
(in TextTestResult) |
sherekhan
(in specific_analyses.relax_disp) |
status
(in pipe_control.molmol) |
seq_align
(in data_store) |
sherekhan_input()
(in specific_analyses.relax_disp.sherekhan) |
status
(in pipe_control.pipes) |
sequence
(in gui.input_elements) |
Show()
(in Results_viewer) |
status
(in pipe_control.pymol_control) |
Sequence
(in gui.input_elements.sequence) |
Show()
(in Spin_view_window) |
status
(in pipe_control.result_files) |
sequence
(in lib) |
show_apod_extract()
(in lib.spectrum.nmrpipe) |
status
(in pipe_control.script) |
sequence
(in pipe_control) |
show_apod_rmsd()
(in lib.spectrum.nmrpipe) |
status
(in pipe_control.state) |
sequence
(in test_suite.system_tests) |
show_apod_rmsd_dir_to_files()
(in lib.spectrum.nmrpipe) |
status
(in pipe_control.structure.geometric) |
Sequence
(in test_suite.system_tests.sequence) |
show_apod_rmsd_to_file()
(in lib.spectrum.nmrpipe) |
status
(in pipe_control.structure.main) |
sequence
(in user_functions) |
show_controller()
(in Main) |
status
(in pipe_control.system) |
sequence_2D
(in gui.input_elements) |
show_pipe_editor()
(in Main) |
status
(in pipe_control.value) |
Sequence_2D
(in gui.input_elements.sequence_2D) |
show_prompt()
(in Main) |
status
(in prompt.command) |
sequence_alignment
(in lib) |
show_results_viewer()
(in Main) |
status
(in prompt.help) |
sequence_alignment()
(in pipe_control.structure.main) |
show_results_viewer_no_warn()
(in Main) |
status
(in prompt.interpreter) |
Sequence_alignments
(in data_store.seq_align) |
show_results_viewer_safe()
(in Main) |
status
(in prompt.uf_docstring) |
Sequence_base_class
(in test_suite.unit_tests.sequence_testing_base) |
show_splash()
(in App) |
status
(in prompt.uf_objects) |
Sequence_list_ctrl
(in gui.input_elements.sequence) |
show_tree()
(in Main) |
status
(in relax) |
sequence_testing_base
(in test_suite.unit_tests) |
showApod_software
(in dep_check) |
status
(in scons.manuals) |
Sequence_window
(in gui.input_elements.sequence) |
ShowModal()
(in Question) |
status
(in setup) |
Sequence_window_2D
(in gui.input_elements.sequence_2D) |
showwarning_tb()
(in lib.warnings) |
status |
set()
(in AlignTensorData) |
shrink()
(in Simplex) |
Status
(in status) |
set()
(in DiffTensorData) |
signal_noise_ratio()
(in pipe_control.spectrum) |
status
(in test_suite.gui_tests.base_classes) |
set()
(in Verbosity) |
SIGNBIT
(in lib.float) |
status
(in test_suite.gui_tests.bruker) |
set()
(in pipe_control.align_tensor) |
sim_init_values()
(in API_base) |
status
(in test_suite.gui_tests.frame_order) |
set()
(in pipe_control.diffusion_tensor) |
sim_init_values()
(in Frame_order) |
status
(in test_suite.gui_tests.general) |
set()
(in pipe_control.minimise) |
sim_init_values()
(in Model_free) |
status
(in test_suite.gui_tests.model_free) |
set()
(in pipe_control.value) |
sim_init_values()
(in N_state_model) |
status
(in test_suite.gui_tests.n_state_model) |
set()
(in Param_list) |
sim_init_values()
(in Relax_disp) |
status
(in test_suite.gui_tests.noe) |
set_align_id()
(in pipe_control.align_tensor) |
sim_pack_data()
(in API_base) |
status
(in test_suite.gui_tests.relax_disp) |
set_background()
(in About_base) |
sim_pack_data()
(in Frame_order) |
status
(in test_suite.gui_tests.rx) |
set_base_cpmg()
(in Relax_disp_rep) |
sim_pack_data()
(in N_state_model) |
status
(in test_suite.gui_tests.state) |
set_bitmap_mol()
(in Mol_res_spin_tree) |
sim_pack_data()
(in Relax_disp) |
status
(in test_suite.gui_tests.test_user_functions) |
set_bitmap_res()
(in Mol_res_spin_tree) |
sim_pack_data()
(in Relax_fit) |
status
(in test_suite.relax_test_loader) |
set_bitmap_spin()
(in Mol_res_spin_tree) |
sim_return_chi2()
(in API_base) |
status
(in test_suite.relax_test_runner) |
set_box_label()
(in Base_list) |
sim_return_chi2()
(in Model_free) |
status
(in test_suite.system_tests.angles) |
set_box_label()
(in Molecule) |
sim_return_param()
(in API_base) |
status
(in test_suite.system_tests.bmrb) |
set_box_label()
(in Relax_data_meta_list) |
sim_return_param()
(in Consistency_tests) |
status
(in test_suite.system_tests.bruker) |
set_dist()
(in pipe_control.interatomic) |
sim_return_param()
(in Frame_order) |
status
(in test_suite.system_tests.chemical_shift) |
set_domain()
(in pipe_control.align_tensor) |
sim_return_param()
(in Jw_mapping) |
status
(in test_suite.system_tests.consistency_tests) |
set_error()
(in API_base) |
sim_return_param()
(in Model_free) |
status
(in test_suite.system_tests.dasha) |
set_error()
(in Consistency_tests) |
sim_return_param()
(in N_state_model) |
status
(in test_suite.system_tests.diffusion_tensor) |
set_error()
(in Frame_order) |
sim_return_param()
(in Relax_disp) |
status
(in test_suite.system_tests.frame_order) |
set_error()
(in Jw_mapping) |
sim_return_selected()
(in API_base) |
status
(in test_suite.system_tests.generic) |
set_error()
(in Model_free) |
sim_return_selected()
(in Consistency_tests) |
status
(in test_suite.system_tests.grace) |
set_error()
(in N_state_model) |
sim_return_selected()
(in Frame_order) |
status
(in test_suite.system_tests.interatomic) |
set_error()
(in Relax_disp) |
sim_return_selected()
(in Jw_mapping) |
status
(in test_suite.system_tests.jw_mapping) |
set_errors()
(in pipe_control.pcs) |
sim_return_selected()
(in Model_free) |
status
(in test_suite.system_tests.load_spins) |
set_errors()
(in pipe_control.rdc) |
sim_return_selected()
(in Relax_disp) |
status
(in test_suite.system_tests.model_elimination) |
set_exp_type()
(in specific_analyses.relax_disp.data) |
SIMILARITY_DNA
(in lib.sequence_alignment.substitution_matrices) |
status
(in test_suite.system_tests.model_free) |
set_fixed()
(in AlignTensorData) |
SIMILARITY_DNA_SEQ
(in lib.sequence_alignment.substitution_matrices) |
status
(in test_suite.system_tests.model_selection) |
set_fixed()
(in DiffTensorData) |
simple_types
(in BaseArgError) |
status
(in test_suite.system_tests.mol_res_spin) |
set_frequency()
(in pipe_control.spectrometer) |
simple_types
(in RelaxBinError) |
status
(in test_suite.system_tests.n_state_model) |
set_frq()
(in specific_analyses.consistency_tests.uf) |
simple_types
(in RelaxBoolError) |
status
(in test_suite.system_tests.noe) |
set_frq()
(in specific_analyses.jw_mapping.uf) |
simple_types
(in RelaxFloatError) |
status
(in test_suite.system_tests.noe_restraints) |
set_init_state()
(in Analysis_controller) |
simple_types
(in RelaxFunctionError) |
status
(in test_suite.system_tests.palmer) |
set_int()
(in Relax_disp_rep) |
simple_types
(in RelaxIntError) |
status
(in test_suite.system_tests.pcs) |
set_intensity_and_error()
(in Relax_disp_rep) |
simple_types
(in RelaxIntListIntError) |
status
(in test_suite.system_tests.peak_lists) |
set_memo_id()
(in Slave_command) |
simple_types
(in RelaxIntStrError) |
status
(in test_suite.system_tests.pipes) |
set_model()
(in Internal) |
simple_types
(in RelaxNoneFloatError) |
status
(in test_suite.system_tests.rdc) |
set_param_values()
(in API_base) |
simple_types
(in RelaxNoneFloatListError) |
status
(in test_suite.system_tests.relax_data) |
set_param_values()
(in Model_free) |
simple_types
(in RelaxNoneFloatStrListError) |
status
(in test_suite.system_tests.relax_disp) |
set_param_values()
(in N_state_model) |
simple_types
(in RelaxNoneFunctionError) |
status
(in test_suite.system_tests.relax_fit) |
set_param_values()
(in Relax_disp) |
simple_types
(in RelaxNoneIntError) |
status
(in test_suite.system_tests.results) |
set_selected_sim()
(in API_base) |
simple_types
(in RelaxNoneIntListIntError) |
status
(in test_suite.system_tests.sequence) |
set_selected_sim()
(in Frame_order) |
simple_types
(in RelaxNoneIntStrError) |
status
(in test_suite.system_tests.spectrum) |
set_selected_sim()
(in Model_free) |
simple_types
(in RelaxNoneListError) |
status
(in test_suite.system_tests.state) |
set_selected_sim()
(in Relax_disp) |
simple_types
(in RelaxNoneListIntError) |
status
(in test_suite.system_tests.structure) |
set_selection()
(in Model_sel_window) |
simple_types
(in RelaxNoneListNumError) |
status
(in test_suite.system_tests.unit_vectors) |
set_self()
(in Relax_disp_rep) |
simple_types
(in RelaxNoneListStrError) |
status
(in test_suite.test_suite_runner) |
set_seq_next_fn()
(in Wiz_window) |
simple_types
(in RelaxNoneNumError) |
status
(in test_suite.unit_tests._lib._dispersion.test_matrix_exponential) |
set_settings_leastsq()
(in Exp) |
simple_types
(in RelaxNoneNumStrListNumStrError) |
status
(in test_suite.unit_tests._lib._frame_order.test_matrix_ops) |
set_settings_minfx()
(in Exp) |
simple_types
(in RelaxNoneNumTupleNumError) |
status
(in test_suite.unit_tests._pipe_control._structure.test_internal) |
set_sim_num()
(in AlignTensorData) |
simple_types
(in RelaxNoneStrError) |
status
(in test_suite.unit_tests._specific_analyses._model_free.test_api) |
set_sim_num()
(in DiffTensorData) |
simple_types
(in RelaxNoneStrFileError) |
status
(in test_suite.unit_tests._specific_analyses._relax_disp.test_checks) |
set_spin_element()
(in pipe_control.mol_res_spin) |
simple_types
(in RelaxNoneStrListError) |
status
(in test_suite.unit_tests._specific_analyses._relax_disp.test_data) |
set_spin_isotope()
(in pipe_control.mol_res_spin) |
simple_types
(in RelaxNoneStrListNumError) |
status
(in test_suite.unit_tests._target_functions.test_relax_fit) |
set_temperature()
(in pipe_control.spectrometer) |
simple_types
(in RelaxNoneStrListStrError) |
status
(in test_suite.unit_tests.package_checking) |
set_title()
(in TagTable) |
simple_types
(in RelaxNoneTupleError) |
status
(in test_suite.unit_tests.relax_data_testing_base) |
set_type()
(in DiffTensorData) |
simple_types
(in RelaxNoneValListValError) |
status
(in test_suite.unit_tests.sequence_testing_base) |
set_up_spins()
(in Value_base_class) |
simple_types
(in RelaxNumError) |
status
(in test_suite.unit_tests.state_testing_base) |
set_update()
(in API_base) |
simple_types
(in RelaxNumStrListNumStrError) |
status
(in test_suite.verification_tests.library) |
set_update()
(in Model_free) |
simple_types
(in RelaxNumTupleError) |
status
(in test_suite.verification_tests.status_object) |
set_vals()
(in Free_file_format) |
simple_types
(in RelaxNumTupleNumError) |
status
(in version) |
set_value()
(in Model_list) |
simple_types
(in RelaxStrError) |
status_object
(in test_suite.verification_tests) |
set_value()
(in specific_analyses.relax_disp.parameters) |
simple_types
(in RelaxStrFileError) |
Status_object
(in test_suite.verification_tests.status_object) |
set_vector()
(in pipe_control.structure.main) |
simple_types
(in RelaxStrListNumError) |
status_setup()
(in dAuvergne_protocol) |
set_version()
(in Star_version) |
simple_types
(in RelaxStrListStrError) |
status_start()
(in Relax_disp_rep) |
set_xh_vect()
(in specific_analyses.model_free.back_compat) |
simple_types
(in RelaxValListValError) |
status_stop()
(in Relax_disp_rep) |
| setup |
simplex
(in minfx) |
std()
(in lib.statistics) |
Setup
(in setup) |
Simplex
(in minfx.simplex) |
stdio_capture()
(in Processor) |
setup()
(in Citations) |
simplex()
(in minfx.simplex) |
stdio_restore()
(in Processor) |
setup()
(in Molecule) |
simulate()
(in specific_analyses.frame_order.uf) |
steepest_descent
(in minfx) |
setup()
(in Relax_data_list) |
simulation
(in lib.frame_order) |
Steepest_descent
(in minfx.steepest_descent) |
setup()
(in Relax_data_meta_list) |
simulation_flag()
(in Param_list) |
steepest_descent()
(in minfx.steepest_descent) |
setup()
(in Scripts) |
SINGLE
(in bmrblib.pystarlib.Text) |
Steihaug
(in minfx.steihaug_cg) |
setup()
(in Software) |
singleq
(in bmrblib.pystarlib.Text) |
steihaug()
(in minfx.steihaug_cg) |
setup()
(in Spectra_list) |
size
(in Local_tm_list) |
steihaug_cg
(in minfx) |
setup()
(in Font) |
size
(in Mf_list) |
stereochem_analysis
(in auto_analyses) |
setup()
(in Relax_icons) |
size
(in Disp_model_list) |
Stereochem_analysis
(in auto_analyses.stereochem_analysis) |
setup()
(in lib.warnings) |
size
(in Model_list) |
stopTest()
(in GuiTestResult) |
setUp()
(in GuiTestCase) |
SIZE
(in Free_file_format_window) |
stopTest()
(in RelaxTestResult) |
setUp()
(in Bmrb) |
SIZE
(in Selector_file_window) |
store_bc_data()
(in specific_analyses.frame_order.optimisation) |
setUp()
(in Bruker) |
SIZE
(in Sequence_window) |
store_data()
(in MF_minimise_command) |
setUp()
(in Ct) |
size
(in Results_viewer) |
STR
(in lib.errors) |
setUp()
(in Frame_order) |
SIZE_BUTTON
(in Free_file_format_window) |
str_to_gui()
(in gui.string_conv) |
setUp()
(in Interatomic) |
SIZE_BUTTON
(in Selector_file_window) |
strf
(in AllChecks) |
setUp()
(in Jw_mapping) |
SIZE_BUTTON
(in Sequence_window) |
stride_help_array_rank_NE_NS_NM_NO_ND_x()
(in lib.dispersion.matrix_power) |
setUp()
(in Align_tensor) |
size_button
(in Wiz_page) |
stride_help_element_rank_NE_NS_NM_NO_ND()
(in lib.dispersion.matrix_power) |
setUp()
(in Bmrb) |
size_cols()
(in Base_list) |
stride_help_square_matrix_rank_NE_NS_NM_NO_ND_x_x()
(in lib.dispersion.matrix_power) |
setUp()
(in Bruker) |
size_cols()
(in Pipe_editor) |
string
(in lib.text) |
setUp()
(in Chemical_shift) |
size_cols()
(in Results_viewer) |
string_conv
(in gui) |
setUp()
(in Ct) |
size_graphic_panel
(in Base_analysis) |
string_transpose()
(in Test_kronecker_product) |
setUp()
(in Dasha) |
size_square_button
(in Free_file_format) |
strip()
(in lib.io) |
setUp()
(in Diffusion_tensor) |
size_square_button
(in Wiz_page) |
strip_comments()
(in lib.software.xplor) |
setUp()
(in Frame_order) |
skip_function()
(in API_base) |
strip_lead()
(in lib.text.string) |
setUp()
(in Grace) |
skip_function()
(in Hybrid) |
strip_remarks()
(in Structure) |
setUp()
(in Jw) |
skip_function()
(in Model_free) |
structural_noise()
(in pipe_control.pcs) |
setUp()
(in Load_spins) |
Slave_command
(in multi.slave_commands) |
structure
(in bmrblib) |
setUp()
(in Modelim) |
slave_commands
(in multi) |
structure
(in lib) |
setUp()
(in Mf) |
slave_receive_commands()
(in Mpi4py_processor) |
structure
(in pipe_control) |
setUp()
(in Mol_res_spin) |
slave_receive_commands()
(in Multi_processor) |
structure
(in test_suite.system_tests) |
setUp()
(in Noe) |
Slave_storage_command
(in multi.slave_commands) |
Structure
(in test_suite.system_tests.structure) |
setUp()
(in Noe_restraints) |
sn_ratio_deselection()
(in pipe_control.spectrum) |
structure
(in user_functions) |
setUp()
(in Palmer) |
sn_ratio_selection()
(in pipe_control.spectrum) |
Structure_base_class
(in test_suite.unit_tests.structure_testing_base) |
setUp()
(in Peak_lists) |
Sobol_data
(in target_functions.frame_order) |
structure_loop()
(in pipe_control.structure.main) |
setUp()
(in Relax_disp) |
sobol_data
(in target_functions.frame_order) |
structure_testing_base
(in test_suite.unit_tests) |
setUp()
(in Relax_fit) |
sobol_setup()
(in Frame_order_analysis) |
style
(in About_base) |
setUp()
(in Results) |
sobol_setup()
(in specific_analyses.frame_order.uf) |
style
(in About_window) |
setUp()
(in Selection) |
software
(in bmrblib.experimental_details) |
subprocess_module
(in dep_check) |
setUp()
(in Sequence) |
Software
(in bmrblib.experimental_details.software) |
subprocess_module
(in lib.spectrum.nmrpipe) |
setUp()
(in Spectrum) |
software
(in gui.components) |
subprocess_module_message
(in dep_check) |
setUp()
(in State) |
Software
(in gui.components.software) |
SUBSECTION
(in lib.text.string) |
setUp()
(in Structure) |
software
(in lib) |
subsection()
(in lib.text.sectioning) |
setUp()
(in Unit_vectors) |
SOFTWARE
(in pipe_control.exp_info) |
substitution_matrices
(in lib.sequence_alignment) |
setUp()
(in Value) |
software()
(in pipe_control.exp_info) |
subsubsection()
(in lib.text.sectioning) |
setUp()
(in Test___init__) |
software_select()
(in pipe_control.exp_info) |
subsubtitle()
(in lib.text.sectioning) |
setUp()
(in Test___init__) |
software_setup()
(in ExpInfo) |
subtitle()
(in lib.text.sectioning) |
setUp()
(in Test_align_tensor) |
Software_store
(in pipe_control.exp_info) |
subtitle()
(in test_suite.formatting) |
setUp()
(in Test_diff_tensor) |
software_v3_1
(in bmrblib.experimental_details) |
suite
(in Test_finder) |
setUp()
(in Test_mol_res_spin) |
Software_v3_1
(in bmrblib.experimental_details.software_v3_1) |
summarise()
(in auto_analyses.frame_order) |
setUp()
(in Test_pipe_container) |
SoftwareCitation
(in bmrblib.experimental_details.software) |
summarize_results()
(in Relax_disp_rep) |
setUp()
(in Test_seq_align) |
SoftwareCitation_v3_1
(in bmrblib.experimental_details.software_v3_1) |
summary()
(in Test_suite_runner) |
setUp()
(in Test___init__) |
SoftwareSaveframe
(in bmrblib.experimental_details.software) |
summary_line()
(in test_suite.formatting) |
setUp()
(in Test___init__) |
SoftwareSaveframe_v3_1
(in bmrblib.experimental_details.software_v3_1) |
summary_skipped()
(in Test_suite_runner) |
setUp()
(in Test___init__) |
sort_filenames()
(in lib.io) |
superimpose
(in lib.structure) |
setUp()
(in Test___init__) |
sort_models()
(in specific_analyses.relax_disp.model) |
superimpose()
(in Stereochem_analysis) |
setUp()
(in Test___init__) |
sourceid
(in Clore90) |
superimpose()
(in pipe_control.structure.main) |
setUp()
(in Test___init__) |
sourceid
(in LipariSzabo82a) |
svd()
(in pipe_control.align_tensor) |
setUp()
(in Test_b14) |
sourceid
(in LipariSzabo82b) |
swap_extension()
(in lib.io) |
setUp()
(in Test_cr72) |
space
(in bmrblib.pystarlib.Text) |
switch()
(in pipe_control.pipes) |
setUp()
(in Test_cr72_full_cluster_one_field) |
space_probe()
(in Frame_order) |
switch_page()
(in Analysis_controller) |
setUp()
(in Test_cr72_full_cluster_three_fields) |
spacer_button
(in Question) |
switch_pipes()
(in Results_viewer) |
setUp()
(in Test_dpl94) |
spacer_horizontal
(in Base_analysis) |
SYMLINK
(in script-sconstruct) |
setUp()
(in Test_it99) |
spacer_main
(in Question) |
SYMLINK_FLAG
(in script-sconstruct) |
setUp()
(in Test_lm63) |
sparky
(in lib.spectrum) |
sync_ds()
(in Auto_model_free) |
setUp()
(in Test_m61) |
specific_analyses |
sync_ds()
(in Auto_noe) |
setUp()
(in Test_m61b) |
Spectra_list
(in gui.components.spectrum) |
sync_ds()
(in Auto_relax_disp) |
setUp()
(in Test_matrix_exponential) |
spectral_densities
(in lib) |
sync_ds()
(in Auto_rx) |
setUp()
(in Test_mmq_cr72) |
Spectral_error_type_page
(in gui.wizards.peak_intensity) |
sync_ds()
(in Grid_base) |
setUp()
(in Test_mp05) |
spectrometer
(in pipe_control) |
sync_ds()
(in Main) |
setUp()
(in Test_ns_cpmg_2site_3d) |
spectrometer
(in user_functions) |
SYS
(in script-sconstruct) |
setUp()
(in Test_ns_cpmg_2site_expanded) |
spectrum
(in gui.components) |
sys_info
(in user_functions) |
setUp()
(in Test_tap03) |
spectrum
(in lib) |
sys_info()
(in Info_box) |
setUp()
(in Test_tp02) |
spectrum
(in pipe_control) |
system
(in dep_check) |
setUp()
(in Test_tsmfk01) |
spectrum
(in test_suite.system_tests) |
SYSTEM
(in lib.compat) |
setUp()
(in Test___init__) |
Spectrum
(in test_suite.system_tests.spectrum) |
system
(in pipe_control) |
setUp()
(in Test_matrix_ops) |
spectrum
(in user_functions) |
SYSTEM
(in script-sconstruct) |
setUp()
(in Test___init__) |
spectrum_type()
(in specific_analyses.noe.uf) |
SYSTEM
(in test_suite.system_tests.frame_order) |
setUp()
(in Test_rotations) |
sphere()
(in pipe_control.diffusion_tensor) |
SYSTEM
(in test_suite.system_tests.model_free) |
setUp()
(in Test___init__) |
spherical_to_cartesian()
(in lib.geometry.coord_transform) |
system()
(in prompt.command) |
setUp()
(in Test_kronecker_product) |
spheroid()
(in pipe_control.diffusion_tensor) |
system_cwd()
(in Main) |
setUp()
(in Test___init__) |
spheroid_frame()
(in pipe_control.angles) |
system_path_pattern
(in Unit_test_runner) |
setUp()
(in Test___init__) |
Spin
(in gui.spin_viewer.containers) |
System_test_runner
(in test_suite.system_tests) |
setUp()
(in Test___init__) |
spin
(in test_suite.unit_tests._pipe_control) |
system_tests
(in test_suite) |
setUp()
(in Test___init__) |
spin
(in user_functions) |
SystemTestCase
(in test_suite.system_tests.base_classes) |
setUp()
(in Test___init__) |
Spin_base_class
(in test_suite.unit_tests.spin_testing_base) |
|
setUp()
(in Test___init__) |
spin_count()
(in Base_analysis) |
|